Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00036 ATGCCTCACAGAGCGACTTACTTTTTCCCCAGGCAGTTCCCGGAGCGTGGGTTGGATGAATCTTCGAAACAACTATTAGATCACGAGAAGAAGAAAATAGTCAACTCCATCAAATCAGAAACCTTTGACCCTGAAAGCGACCCCAAAAAGGCAATTAGAACAACTACTGCCACAACAACAGAGGACGATGTCGTTTTCCCGTCTGGGAAACACTCAGCTGTATCCGACCTTTTCACGGGCAATGACAAGTTCCGGACCAAGCAGAAGCTAGTCGCTGCTTTCCGCGACTGGGTGATAGAGAAAAAGGGGGATAGATGGGGTCACGTGAAACCACATCCTGGCCGGCTATCCTATGAGGGGGATCGCGAGCTTCTGCTTCCATCGGAGTCCGTGCCTCCTCCGCCACCGGAGACAGTGAAAGATGCAATCGACCGGGGTTTTGACCGCCAAGTCTCCTTGCCGAGGTTATCCAGCGGCAGCAGCTATGCTGGGAGCTTGTTCTCGGGGACAACCTTGGACGGCAACTTTTCTAGCGACGTTAAGGAGGAAACGACATCGTCTCGGGTCTCCTCCACAACAAGAAGACTGGAGGAAGAAAAGGAGGAAGCAGAAAGTAAGGAGACGTTGGCGCAGAAGTGCAAAGAGAGCTACAGCCTGCAGATCACGCTGGCTAGGAGAGTCACCTGTCTAGCAAGTCTCGCTGCTGATGAGCCTGTGCTTACTTTGGACGCTGGAATCGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGCGGCTGCTTATCATACTCCGACAAAATATCAGATGGTTTTTATAACATTTTGGGGATGAATCCATATCTGTGGGTGATGTGCAATGAGCTGGAGGAAGACAGGCGGCTCCCACCTTTGATGGCGCTTAAAGCAGTCGAACCAAACGAGTCGTCTATGGAGGTGGTTGTTGTGGATAGACACGAGGACTCTAGGCTAAAGGAACTTCATGATAAAGCACAAGAATTGTATTGTGACTCAGAGAACACCTTGGTATTGGTGGAAAAACTTGGAAAACTTGTTGCGATATATATGGGGGGTGCTTTCCCGGCGGAGCAAGGAGACCTCCGCAAGCAATGGAAGTTGATTAGTAAGAGATTGAGGAATTTTCATAAGTGTGTTGTGCTTCCTATCGGCAGCTTATCTGCAGGACTTTGCAGGCATCGGGCCATCCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTCGTCAAGATTAAAGATCACAGCCAACTCTCTAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTTCACGGGCCAGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCTTTTCAAATTTCTCATATACTGGAATCTCAGTCTCCTTATATGGATGATGCGTTAAGTTCTCGGTTTTCAAGTTCCATAGTCAGTTCTGTTGTTCCTGAAAGTCATGTATATTCTGGCTGTACAAAGAAAGATAAACTTTTCAAAGGAAATTATTTGCTTAAATGTCCTGTGAACTCAAAATATGCTTCAGTGGATCAAACTCATGCAGTTAATGCAGAGGAACGTGAAGTTCTAGGTTCGAATCTGTCTTCCATTCAGCAAGGTGTTTCTGAAGACCTGCATTCAACCACTGAAGCATTGTTGCATGAATATCCCATGCATGTTGAGGATTCAGTTGTTGTGAAAGAAACTTCCAATAATGAGAGTATTGTAACCGGAAGTCCAGTAGCAAAAGCTACTTCTAAGAAGCCTATACTGGGCCCATCCTGCCAGTCAGAACAAGAATCTGTAGATAGTAGACTTGAAAACTGTGACCGTTTCTCTGCTGGAAACATTCCAAGATATTTGAACATTGAACCATCACTCGCCATGGATTGGCTTGAAATATCGTGGGATGAATTACGCATTAAAGAGCGTGTTGGTGCCGGGTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCTGATGTTGCAGTCAAGGTTTTAACAATTCAGGATTTCCAGGATGACCAGTTGAAAGAGTTTCTCAGAGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTTCTCTTCATGGGCGCAGTTACAAAACGGCCTAATCTATCAATTGTTACAGAATATTTGCCAAGGGGTAGTTTGTACCGCCTGATACATAGGCCAGCATCTGGTGAAATGTTGGATCAGAGGAGACGACTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTACACTGTTTGAGCCCTCCAATCGTGCATTGGGATCTCAAATCTCCAAATTTGTTAGTTGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCGAGATTTAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAATGGATGGCTCCAGAATTTCTACGTGGAGAGCCTTCAAATGAGAAGTCCGATGTTTACAGCTTTGGAGTCATCCTGTGGGAGCTTGTGACCATGCAGCAACCATGGAATGGGCTCAGTCCTGCCCAGGTGGTTGGAGCTGTTGCCTTTCAGAATCGGAAGCTTGCTATCCCTCTAAACATCTCCCCAGTATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATGATCCCAAGGAAAGGCCTTCTTTCTCCAATATAGTCGAATCGCTAAAGAAGCTGCTGAGGTCTCCGGTGGAGATGATAAAAATGGGTGGGACATGA 2805 0.462 MPHRATYFFPRQFPERGLDESSKQLLDHEKKKIVNSIKSETFDPESDPKKAIRTTTATTTEDDVVFPSGKHSAVSDLFTGNDKFRTKQKLVAAFRDWVIEKKGDRWGHVKPHPGRLSYEGDRELLLPSESVPPPPPETVKDAIDRGFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDVKEETTSSRVSSTTRRLEEEKEEAESKETLAQKCKESYSLQITLARRVTCLASLAADEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEEDRRLPPLMALKAVEPNESSMEVVVVDRHEDSRLKELHDKAQELYCDSENTLVLVEKLGKLVAIYMGGAFPAEQGDLRKQWKLISKRLRNFHKCVVLPIGSLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDHSQLSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPFQISHILESQSPYMDDALSSRFSSSIVSSVVPESHVYSGCTKKDKLFKGNYLLKCPVNSKYASVDQTHAVNAEEREVLGSNLSSIQQGVSEDLHSTTEALLHEYPMHVEDSVVVKETSNNESIVTGSPVAKATSKKPILGPSCQSEQESVDSRLENCDRFSAGNIPRYLNIEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPNLSIVTEYLPRGSLYRLIHRPASGEMLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRKLAIPLNISPVLASLMESCWADDPKERPSFSNIVESLKKLLRSPVEMIKMGGT 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00036 934 Coils Coil 186 216 - -
Pral5518g00036 934 SUPERFAMILY Protein kinase-like (PK-like) 642 918 IPR011009 -
Pral5518g00036 934 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 203 923 - -
Pral5518g00036 934 MobiDBLite consensus disorder prediction 177 191 - -
Pral5518g00036 934 CDD STKc_MAP3K-like 670 918 - -
Pral5518g00036 934 Pfam Ethylene-responsive protein kinase Le-CTR1 251 459 - -
Pral5518g00036 934 ProSiteProfiles Protein kinase domain profile. 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00036 934 SMART serkin_6 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00036 934 PRINTS Tyrosine kinase catalytic domain signature 738 751 IPR001245 GO:0004672|GO:0006468
Pral5518g00036 934 PRINTS Tyrosine kinase catalytic domain signature 845 867 IPR001245 GO:0004672|GO:0006468
Pral5518g00036 934 PRINTS Tyrosine kinase catalytic domain signature 779 797 IPR001245 GO:0004672|GO:0006468
Pral5518g00036 934 PRINTS Tyrosine kinase catalytic domain signature 889 911 IPR001245 GO:0004672|GO:0006468
Pral5518g00036 934 Gene3D Transferase(Phosphotransferase) domain 1 743 929 - -
Pral5518g00036 934 Pfam Protein tyrosine and serine/threonine kinase 664 918 IPR001245 GO:0004672|GO:0006468
Pral5518g00036 934 ProSitePatterns Protein kinases ATP-binding region signature. 670 691 IPR017441 GO:0005524
Pral5518g00036 934 FunFam Serine/threonine-protein kinase isoform 1 654 742 - -
Pral5518g00036 934 FunFam Serine/threonine-protein kinase CTR1 743 928 - -
Pral5518g00036 934 MobiDBLite consensus disorder prediction 177 203 - -
Pral5518g00036 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Pral5518g00036 934 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00036 Pral-Chr5518 180021 187296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00036 1 933 MAP Kinase Kinase Kinase AT4G24480 57.803 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral5518g00036 PK_Tyr_Ser-Thr 5.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00036 - - gmx:100808435 1302.73