Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00029 ATGAGCGAAGAAGAGGAGAGTTTTATAGAAACGAACTCGGCGCATCCAGGTCTTCTTGGCCCTGCAAAATGTGGCGCACTGAATTTGCAAGACAAACAAAAGCTAGTTCAAGAGATTGCTCGACAATCAAAAGATGCCAGAAATATGCTCTACTCCTTCACCCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAACTTGGCAAAGAGAGGAAGTACACTGGGTATACGAAGACTCAAATGATAGAGTATCTTCTTAAGATAATTTCTAGGAAATCAAAGTTGCACATAGTCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAAGTGGACCTCCATCTCAAGAATTACATTATGTTCCTCTGGCGAATAATAATAAAGGGGAAAAAGTAAAATCCTTGCTGTGTCAGAATGCTGCATGCAGAGCTACTTTGTGTCCAGAAGATGCTTTCTGTAAGAGATGTTCTTGCTGTGTTTGTCATTTTTATGACGATAACAAGGATCCTAGTTTATGGTTGACCTGTGGATCTGATCTTCTTGACGAGAAGGATTCATGTGGAATGTCTTGTCATTTACAATGTGCTTTGAATTATAAGAAGTCTGGAATTTTGAAGGGCAGATTTAGTACAACGTTAGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGAAAGCAATTATTGGTCGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTTACGGATATCCTTGGCTCACAGAATTCTATTAGGAACTGAGGCATACAAAGAAGTACATAAGATTGTGGAAGCTGCTCTCAAGTTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAATGCTTAAGGATGACACGAGGCATTGTGAACAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCGTTTTGATTCAATGTTTCCTAACCTTTACCCTTACTCTGTGGAAAAGAAAGATGAACCAACATGCACTATACGTTTTGAAGAGTGCCTTCCTACCTCTGTGGTCATTGTGCTGGGGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTCTGGCACCGAACATCGACAATGGACTACTCTGAGCAACCTACCTTCATTGTATTAAGGCCAGAAAAAAAGTTTAAGTTGGAAAACCTCTATCCTTCTACTGAGTATTTTTGCAAGGCTTCTCTGTTTAGCAGCACGGGCATTCTGGGCACTGCAGAAGCTAGATGGGTCACCCCTTGTAATCCCAGCGTATCCCTTTTAAAAGTTACTAGAACTGGCAGTGACAGGGATCATATAAGATATTCGCCTCATGGATCCTCTATGACCACTCTGGACATGCATGGACAGGAAAAATACAGGATAGCTGTTGAAAATCATCACCGCATGGAATCTGCCAACTCTGACATCAACTCATTCTCTAGGGACCATACTGCAAAACTTTTCTTCTCTGATAACTTCAGGGCCAAGATTGAAAGGTTCCTCCCAAAGCCTCCATCAATTGAATCTCTTACATCTAAAACTTTTGCTGCGGTTTCACCTCCCACACCTTCGAAATTGGACAAAACGAGACAAGTTACAGGTTTGGGTGGCAGAAAGCGTTTGGAGGAAAATGATTATGAGTACTCTGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATTGATCATAATTTCAGAGTAAAATTTCTGACTTGGTTCAGCCTAAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGTGCTTTTGTGGATGCATTGATTGATGACCCACCGAGCTTAGTTGATCAGCTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAGCCTTAG 1875 0.4123 MSEEEESFIETNSAHPGLLGPAKCGALNLQDKQKLVQEIARQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISRKSKLHIVQNNSHIGSKRKSGPPSQELHYVPLANNNKGEKVKSLLCQNAACRATLCPEDAFCKRCSCCVCHFYDDNKDPSLWLTCGSDLLDEKDSCGMSCHLQCALNYKKSGILKGRFSTTLDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCLRISLAHRILLGTEAYKEVHKIVEAALKLLNNEVGPQDQECLRMTRGIVNRLSCGAEVQKLCSYAVERFDSMFPNLYPYSVEKKDEPTCTIRFEECLPTSVVIVLGYEDHLLKDFLGCRLWHRTSTMDYSEQPTFIVLRPEKKFKLENLYPSTEYFCKASLFSSTGILGTAEARWVTPCNPSVSLLKVTRTGSDRDHIRYSPHGSSMTTLDMHGQEKYRIAVENHHRMESANSDINSFSRDHTAKLFFSDNFRAKIERFLPKPPSIESLTSKTFAAVSPPTPSKLDKTRQVTGLGGRKRLEENDYEYSVRVVKWLEHEGHIDHNFRVKFLTWFSLKANPQERRVVSAFVDALIDDPPSLVDQLIHTFMDEICCEQKP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00029 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 20 463 IPR044514 GO:0010048|GO:0040029
Pral5518g00029 624 CDD PHD_VIN3_plant 155 220 - -
Pral5518g00029 624 Pfam PHD - plant homeodomain finger protein 135 255 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00029 Pral-Chr5518 156188 161629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00029 549 618 PHD Gene Family AT5G57380 45.714 1.34e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00029 - - gmx:100785502 822.387