Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00026 ATGTTATGGCGGCATCTGGCCTATCGCAATGAATTGACTGAAAATTTGGAAGACGGGGCTGAACCTCTGGATGATGATAGTGACTTGGACTGTGAGATGGAGGTGATACCCCCTATTAACAACGAGGCTGCATCAGAGGCTTCAGCTTGTGTGAAGGTTATGATAGCTTCTCGTTTGCTTAATGAAACGGGTCCTAGTAGCTCAACAATTGAGGCTCCAATGACTATAAATATTCCAAATTGTCATTCATCTACAAATCCTGAAGAAAATATACAGCCCTCAAACTTGATGCAAGGAACAAGTGTTATTTTTCCTGTTACTGTTCAGAGACAGACACTACCATCTGGATCTGTGACTGAAGGTGTAGAAGCCAAGGGAACAGCCGCTGTCAAATTGTCTTCCAAAAGGAGAAGAAAGGCATGGTCAGAAGAGGAGGACAAGCAACTACGAGCAGCTGTTCAAAAATGTGGTGAGGGAAATTGGGCAACCATGTCGAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGCTGGCTCAGAGGTGGAGCATTTTACGGAAGAAAGATGGCACTACGAATTCAGGAACAAACTTGACCAGCTCACAGTTTACTGCTGAACAGCTGGCAACTCGTCACTCATTATCTTTAGCCCTTGATATGCCATTAAAAAAATTAACTGTTCCTGGAACGACTGACCCTGCTAGAACGTCACTAAACACATCAATTAAGAACTCTGCGCAACCTGTTAATACTGCTGAAGCTTCAACAATTCAGAGCAGCTCTGTACCACATCAGCTTCCATCTCAACAAGCTGTATTGGGTTCTTCTGCTTCCCCAGCAAATTCTTTAGTCCCTGAAAGAGCAACACTGAAGGCTAATACAAGTGCTGATGCTGCTGTAAGAGCTACTGCAGTTGCAGTTGGTGCACGTATTGTCTCTTCAGCGGATATTTTGTCAGTGCAAAAGACTACTCAGGACAGGAGCGGTGGACAAGTTTTGCCAACTGGCAATTCTTCAATGAAGCTGTCCGCATCTGCTGGTTCTGTCGTCCAGCCAAAAGCTCTTACAAATCCAGCTGTTTCTCCTAAGGTTGTTGCCACCGTACCTCCTTCGTGCACTACTGCTGTTAAATCTGTCTCCTCACCGGGTGAGAGCACTTCTAATGCTGATACTCTTCGCTCTGTTGTCAATGATGTTCCATTAGAGCAAGCTAATCCTAACCAAGAATCAAAAGCCTCTGATTCATGTGTTGACCCAAAAGAGAGGGACCAAGTTGATGGGACACCAGTCTCAGAAAGTATACCTAATGAGGAAGTTTTAGAAAATAAACCGGTTTCACAAAATCCAGGACAGGCTGATGATCAGAGAGTAGTTTGA 1380 0.4435 MLWRHLAYRNELTENLEDGAEPLDDDSDLDCEMEVIPPINNEAASEASACVKVMIASRLLNETGPSSSTIEAPMTINIPNCHSSTNPEENIQPSNLMQGTSVIFPVTVQRQTLPSGSVTEGVEAKGTAAVKLSSKRRRKAWSEEEDKQLRAAVQKCGEGNWATMSKGDDFPIKRSPTQLAQRWSILRKKDGTTNSGTNLTSSQFTAEQLATRHSLSLALDMPLKKLTVPGTTDPARTSLNTSIKNSAQPVNTAEASTIQSSSVPHQLPSQQAVLGSSASPANSLVPERATLKANTSADAAVRATAVAVGARIVSSADILSVQKTTQDRSGGQVLPTGNSSMKLSASAGSVVQPKALTNPAVSPKVVATVPPSCTTAVKSVSSPGESTSNADTLRSVVNDVPLEQANPNQESKASDSCVDPKERDQVDGTPVSESIPNEEVLENKPVSQNPGQADDQRVV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00026 459 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
Pral5518g00026 459 MobiDBLite consensus disorder prediction 322 345 - -
Pral5518g00026 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 191 IPR017930 -
Pral5518g00026 459 SUPERFAMILY Homeodomain-like 136 189 IPR009057 -
Pral5518g00026 459 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 447 - -
Pral5518g00026 459 MobiDBLite consensus disorder prediction 402 459 - -
Pral5518g00026 459 Gene3D - 130 193 - -
Pral5518g00026 459 MobiDBLite consensus disorder prediction 231 281 - -
Pral5518g00026 459 SMART sant 137 189 IPR001005 -
Pral5518g00026 459 CDD SANT_TRF 139 188 - -
Pral5518g00026 459 MobiDBLite consensus disorder prediction 228 281 - -
Pral5518g00026 459 ProSiteProfiles Myb-like domain profile. 133 187 IPR001005 -
Pral5518g00026 459 MobiDBLite consensus disorder prediction 441 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00026 Pral-Chr5518 124859 132234 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5518g00026 Myb_DNA-binding 3.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00026 - - gmx:100805773 419.468