Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00025 ATGGTGGAAGATGATAACACGATCAAGAAGGTCGCTTTCAGCGAGGAAGACGCTGCTGCTCTCTTAGAGAAGTATGATGCAACTACCGTTCTAACTTTTCTCCAGGAAGTGTCGAATTCAAATTATCCTGAGGGCAAGATTGATTGGGATGAGTTGGTAAAAAATACCGCAACTGGTATATCAAATGCTCGAGAGTATCAGATGTTATGGCGGCATCTGGCCTATCGCAATGAATTGACTGAAAATTTGGAAGACGGGGCTGAACCTCTGGATGATGATAGTGACTTGGACTGTGAGATGGAGGTGATACCCCCTATTAACAACGAGGCTGCATCAGAGGCTTCAGCTTGTGTGAAGGTTATGATAGCTTCTCGTTTGCTTAATGAAACGGGTCCTAGTAGCTCAACAATTGAGGCTCCAATGACTATAAATATTCCAAATTGTCATTCATCTACAAATCCTGAAGAAAATATACAGCCCTCAAACTTGATGCAAGGAACAAGTGTTATTTTTCCTGTTACTGTTCAGAGACAGACACTACCATCTGGATCTGTGACTGAAGGTGTAGAAGCCAAGGGAACAGCCGCTGTCAAATTGTCTTCCAAAAGGAGAAGAAAGGCATGGTCAGAAGAGGAGGACAAGCAACTACGAGCAGCTGTTCAAAAATGTGGTGAGGGAAATTGGGCAACCATGTCGAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGCTGGCTCAGAGGTGGAGCATTTTACGGAAGAAAGATGGCACTACGAATTCAGGAACAAACTTGACCAGCTCACAGTTTACTGCTGAACAGCTGGCAACTCGTCACTCATTATCTTTAGCCCTTGATATGCCATTAAAAAAATTAACTGTTCCTGGAACGACTGACCCTGCTAGAACGTCACTAAACACATCAATTAAGAACTCTGCGCAACCTGTTAATACTGCTGAAGCTTCAACAATTCAGAGCAGCTCTGTACCACATCAGCTTCCATCTCAACAAGCTGTATTGGGTTCTTCTGCTTCCCCAGCAAATTCTTTAGTCCCTGAAAGAGCAACACTGAAGGCTAATACAAGTGCTGATGCTGCTGTAAGAGCTACTGCAGTTGCAGTTGGTGCACGTATTGTCTCTTCAGCGGATATTTTGTCAGTGCAAAAGACTACTCAGGACAGGAGCGGTGGACAAGTTTTGCCAACTGGCAATTCTTCAATGAAGCTGTCCGCATCTGCTGGTTCTGTCGTCCAGCCAAAAGCTCTTACAAATCCAGCTGTTTCTCCTAAGGTTGTTGCCACCGTACCTCCTTCGTGCACTACTGCTGTTAAATCTGTCTCCTCACCGGGTGAGAGCACTTCTAATGCTGATACTCTTCGCTCTGTTGTCAATGATGTTCCATTAGAGCAAGCTAATCCTAACCAAGAATCAAAAGCCTCTGATTCATGTGTTGACCCAAAAGAGAGGGACCAAGTTGATGGGACACCAGTCTCAGAAAGTATACCTAATGAGGAAGTTTTAGAAAATAAACCGGTTTCACAAAATCCAGGACAGGCTGATGATCAGAGAGTAGTTTGA 1581 0.4415 MVEDDNTIKKVAFSEEDAAALLEKYDATTVLTFLQEVSNSNYPEGKIDWDELVKNTATGISNAREYQMLWRHLAYRNELTENLEDGAEPLDDDSDLDCEMEVIPPINNEAASEASACVKVMIASRLLNETGPSSSTIEAPMTINIPNCHSSTNPEENIQPSNLMQGTSVIFPVTVQRQTLPSGSVTEGVEAKGTAAVKLSSKRRRKAWSEEEDKQLRAAVQKCGEGNWATMSKGDDFPIKRSPTQLAQRWSILRKKDGTTNSGTNLTSSQFTAEQLATRHSLSLALDMPLKKLTVPGTTDPARTSLNTSIKNSAQPVNTAEASTIQSSSVPHQLPSQQAVLGSSASPANSLVPERATLKANTSADAAVRATAVAVGARIVSSADILSVQKTTQDRSGGQVLPTGNSSMKLSASAGSVVQPKALTNPAVSPKVVATVPPSCTTAVKSVSSPGESTSNADTLRSVVNDVPLEQANPNQESKASDSCVDPKERDQVDGTPVSESIPNEEVLENKPVSQNPGQADDQRVV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00025 526 SMART sant 204 256 IPR001005 -
Pral5518g00025 526 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 258 IPR017930 -
Pral5518g00025 526 MobiDBLite consensus disorder prediction 298 348 - -
Pral5518g00025 526 MobiDBLite consensus disorder prediction 469 526 - -
Pral5518g00025 526 Pfam Myb-like DNA-binding domain 205 250 IPR001005 -
Pral5518g00025 526 CDD SANT_TRF 206 255 - -
Pral5518g00025 526 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 514 - -
Pral5518g00025 526 SUPERFAMILY Homeodomain-like 203 256 IPR009057 -
Pral5518g00025 526 Gene3D - 197 260 - -
Pral5518g00025 526 ProSiteProfiles Myb-like domain profile. 200 254 IPR001005 -
Pral5518g00025 526 MobiDBLite consensus disorder prediction 389 412 - -
Pral5518g00025 526 MobiDBLite consensus disorder prediction 295 348 - -
Pral5518g00025 526 MobiDBLite consensus disorder prediction 508 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00025 Pral-Chr5518 124859 132564 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5518g00025 Myb_DNA-binding 4.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00025 - - gmx:100805773 494.967