Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00019 ATGCAGCTGTCTCACGACATTAGGGCCTACGACAATGGTGGATGCTGCAGTTTTCATCATAAACCAATGGGCGTTGGTCGATTACATTTGGTTAATATCAATCTTTTGCCGCATGGTTTGAGGCGTGATTCTTCAGCTCTCCATCTTTTAAGTAAAGTACATGCCCCACTAAGGCCTGTTCCTTCCAGATGTAATGTTTTATTGTGCCGTTCCATATTAATACCAGGCGGAGGCAGTTGGACCCCGTTAACAAAATCTGCTTCTGTTATCCTGAAAAGATCATATGATGCTTTGCAAGGAAGCGCTGTCACTACTCAATTGATCCCGGCCCTTGGTGTCATTGCCTTTGCTGTTTGTGGTCTTGAACCTCTCATGCGTCTGTGCAGGATTATATTTTTTCAAAGGAATGATAATAGTTGGAAGAAAAGTAGTTCGCGTCATATTATGACATCTTATCTTCAGCCTTTGCTGCTGTGGACTGGGGTTATTCTCACCTGCAGGGCATTAGATCCACTGAACCTACCATCAGAAGCCAGCCAGGCAGTGAAGCAACGGCTGCTGAATTTTGCGAGATCTTTGTCAACTGTGCTCTCATTTGCTTATTGTTTATCAAGCTTAATTCAACAAGCACAAATATTCTTTACGGAGGCAAACGAATCCAATGATGCAAGAAATGTGGGCTTTGATTTTGCTGGGAAAGCTGTGTATACTGCTGTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTATTGCTAACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACGAAGATTGATGGATACGAGGTTTCTGGTGTAGTTGAGCACGTCGGTTGGTGGTCCCCAACTATAGTTAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAATTCACTGTCAACGTGGTGCGGAATCTTACTCAGAGAACTCATTGGCGCATCAAGACTCACCTTGCTATTAGTCACTTGGATGTTAACAAAATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTCTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCATGTCAATACTGAAAATCAGTCTCTTATGATACTAGTATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTGTGTGTCCAGGAGGCAATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACACCCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAACATACCATTTGGTGATACCATTTTTACTCGCTCCAGAGCAGCTGCAAATCGCCCATTTCTACTGATAGAGCCACCTTCCAAAGTTAATGGTGAAGATAGGACCAAGGCTCCTACTCGTTCAACACGCCCGAGCGAAGAAAAAGATGCTAAAATTGATGAAATTTTGACATCTGATTTCAAAGATGACAATATTGCAGCGACATCAACATCAACATCCAGCGCAAACTCCAGGGATAAATCAAAATCAATCTCTGAAGCACAAGCTCAGAATATGGGTTCTGATAGTACTGTCAAGACATCCAAAACCACGCAGCCCAGAAAGGAAAGTGCAGGAGATGCAGGAAAGGCGCCAGCTGCCCCAGTAAATAAAGAACTTGCTCAAAGTGTTGCTCCTGAAAATTCTTCTGCTTCTTCTTCACATGGGTTTGCTGGAAGGGGAGATACTACTCCTGCTGCACCTTTACAGGCAAAGCAGGAAGAAGACAAATATGCTGCATCCCCAGCCAGGCCTTCATTGGAAGAAAATATTGTTCTTGGCGTTGCCCTAGAGGGTTCAAAACGAACCCTTCCAATTGACGAAGAAATGACTCCACCTCCTATCCCCACTGAGGCACAAGATTTTGCTGCCCCAAGAAATGGACATGGAAATGGATCCGCTGCTGGCAAGGATAAAAAGGATGGTCAAGTTTCCACCAAGCAGCAGAGCGATTAG 2094 0.4365 MQLSHDIRAYDNGGCCSFHHKPMGVGRLHLVNINLLPHGLRRDSSALHLLSKVHAPLRPVPSRCNVLLCRSILIPGGGSWTPLTKSASVILKRSYDALQGSAVTTQLIPALGVIAFAVCGLEPLMRLCRIIFFQRNDNSWKKSSSRHIMTSYLQPLLLWTGVILTCRALDPLNLPSEASQAVKQRLLNFARSLSTVLSFAYCLSSLIQQAQIFFTEANESNDARNVGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGVVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVNTENQSLMILVSCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDTIFTRSRAAANRPFLLIEPPSKVNGEDRTKAPTRSTRPSEEKDAKIDEILTSDFKDDNIAATSTSTSSANSRDKSKSISEAQAQNMGSDSTVKTSKTTQPRKESAGDAGKAPAAPVNKELAQSVAPENSSASSSHGFAGRGDTTPAAPLQAKQEEDKYAASPARPSLEENIVLGVALEGSKRTLPIDEEMTPPPIPTEAQDFAAPRNGHGNGSAAGKDKKDGQVSTKQQSD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00019 697 MobiDBLite consensus disorder prediction 522 568 - -
Pral5518g00019 697 MobiDBLite consensus disorder prediction 483 697 - -
Pral5518g00019 697 Gene3D - 291 344 IPR023408 -
Pral5518g00019 697 SUPERFAMILY Sm-like ribonucleoproteins 276 346 IPR010920 -
Pral5518g00019 697 Gene3D - 183 290 - -
Pral5518g00019 697 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 693 IPR045042 -
Pral5518g00019 697 MobiDBLite consensus disorder prediction 489 520 - -
Pral5518g00019 697 MobiDBLite consensus disorder prediction 588 605 - -
Pral5518g00019 697 Pfam Mechanosensitive ion channel 233 440 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00019 Pral-Chr5518 98411 104678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00019 1 655 Mechanosensitive Ion Channel Family AT1G58200 55.407 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00019 K22047 - gmx:100796022 992.645