Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00015 ATGGAGAAAGCAGAAGAAGCTGAACGTTTGCTTGGGGTCGCTGAAAAGCTCTTGTCCGATCGGGATCTCAGCGGCTCGAGAGAATTTGCCATTTTGGCCCAAGAAACCGAACCCCTTCTAGAGGGTTCCGATCAAATCCTGGCCGTCATTGACGTCCTTCTCGCCGCTGATAACCGATTAAACAATCACCTTGACTGGTACTCTATTCTTCAAGTTGATCGCCGATCGGACGACACAGATCTCATCAAGAAGCAATATCGGAGGCTCGCACTTCTCCTCCACCCTGACAAGAACAGGTTCTCACACGCTGATCATGCATTCAAGCTCGTCGCCGAGGCATGGGCTACTCTATCGGATCCTGCCAAAAAGTCGCTCTACGACAAGGAGCTTGGTTCCTTCTCTCCGGTTGATTTGAGCGGGCCCGGCTGGGCTCATCAAGAAAAATTGCCGGTCCGAAGAGCCGGAGCGGGGTTCGCTGGTGGTGGGAACCAGGGGTTTGATTTCAGGAATAATGGCACCGCCACTAGGGACGCTGGAGCCGATGAAAATTCACGACGGAATCCGTCGACCTTCTGGACGGCCTGCCCTTACTGTTATTTGCTGTGCGAGTATCCTAAGATTTACGAGGGATGTTGTCTAAGGTGCCAGAACTGCGAGAGATCGTTCCATGGGGTTTCGATCCCGACATTGCCGCCTCTTGTGGCAGGCCAGGAGGCCTATTATTGTTGCTGGGGATTCTTTCCATTAACTTTAGCCACTGCTAATTCCGTCGGCAAAGAAGCTGCGACCCCTTCAGGATTTCCAAATTGGACGCCCCCCGTATCTCAATATGGCCGGCAGTCAGAGAATGGTTGGAATAAAGCAGAACCCGTGGCGGCCGCAAAGCCTGTGGCAAAGACGGCGAAGGCCGGAGGTATTTCTAATGGGATCCGTTCAGGCTCGGGATCTAGTGGGCGGAAGCGAGGAAGACCGAGGAAGGCCCCAGGAGAATCCTTTATTGTTATAAACTAA 1011 0.5292 MEKAEEAERLLGVAEKLLSDRDLSGSREFAILAQETEPLLEGSDQILAVIDVLLAADNRLNNHLDWYSILQVDRRSDDTDLIKKQYRRLALLLHPDKNRFSHADHAFKLVAEAWATLSDPAKKSLYDKELGSFSPVDLSGPGWAHQEKLPVRRAGAGFAGGGNQGFDFRNNGTATRDAGADENSRRNPSTFWTACPYCYLLCEYPKIYEGCCLRCQNCERSFHGVSIPTLPPLVAGQEAYYCCWGFFPLTLATANSVGKEAATPSGFPNWTPPVSQYGRQSENGWNKAEPVAAAKPVAKTAKAGGISNGIRSGSGSSGRKRGRPRKAPGESFIVIN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00015 336 Pfam DnaJ domain 65 127 IPR001623 -
Pral5518g00015 336 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pral5518g00015 336 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pral5518g00015 336 PRINTS DnaJ domain signature 67 85 IPR001623 -
Pral5518g00015 336 MobiDBLite consensus disorder prediction 299 336 - -
Pral5518g00015 336 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pral5518g00015 336 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 294 - -
Pral5518g00015 336 CDD DnaJ 65 119 IPR001623 -
Pral5518g00015 336 Gene3D DnaJ domain 54 135 IPR036869 -
Pral5518g00015 336 ProSiteProfiles dnaJ domain profile. 65 130 IPR001623 -
Pral5518g00015 336 SMART dnaj_3 64 122 IPR001623 -
Pral5518g00015 336 SUPERFAMILY Chaperone J-domain 58 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00015 Pral-Chr5518 80617 82052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00015 6 328 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.813 2.08e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00015 - - qsa:O6P43_019566 387.497