Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00010 ATGAAAGGTGAATATGTGGAGCAACAGGCCAAGGCCGATCCTCCCAGTATGTTCTCGAAGCTTCACCACCATCCCTTTCCCCACCACCCCTTCCAGCTCTCTCGCGAATCTCAAACCTCCGAGGAAGATGATAATCGCAGCGCCAGCGCCGGCGCCACCCCTAACCACCCTCAGAAGCCCATGTCCCGCGAGCCCTCCTCCGCCGCCGATGGCTCCAGCATTGAGGTCGTGAGGCGCCCCAGAGGCCGTCCTCCTGGCTCCAAGAACAAGCCCAAGCCGCCCGTCATCATAACTCGCGACCCCGAGCCTACCATGAGTTCCTTCATTCTCGAAGTCCCTGGCGGAACGGACGTCGTCGAAGCGATTGCTCGCTTTTGTCGCCGCAAGAACACTGGTCTCTGTGTGTTAACTGGATCGGGGACCGTCGCTAACGTCACCCTTCGTCAACCCTCTACTACCCCGGGGGCTACCGTTACTTTTCACGGCCGTTTTGATATCTTATCCATATCCGCCACCTTTCTGGCCAACCAGCAGTCGGGTGCTTTGCCGGCGGTCCCCAACAGCTTTACGATATCGCTGGCGGGTCCACAGGGTCAGATCGTTGGAGGATTGGTCGCTGGCAGTTTGTTGGCGGCGGGAACCGTGTTCGTTGTCGCTGCTTCCTTCAACAACCCATCTTACCACAGGTTGCCAGCTGAAGAGGACGTTAGAAACTCCGTCTCGGGCGGCGGCGGAGATGGGCAGTCCCCGCCGATATCTGGAGGCGGTGGGGAGAGCGGTCACGCGCCTGGTGATTCGTGTGGGATGTCTATGTATAGCTGTCAATTACCATCCGATGTGATCTGGGCTCCGACTGCAAGACCGCCGCCGCCATACTGA 879 0.5916 MKGEYVEQQAKADPPSMFSKLHHHPFPHHPFQLSRESQTSEEDDNRSASAGATPNHPQKPMSREPSSAADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSSFILEVPGGTDVVEAIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLANQQSGALPAVPNSFTISLAGPQGQIVGGLVAGSLLAAGTVFVVAASFNNPSYHRLPAEEDVRNSVSGGGGDGQSPPISGGGGESGHAPGDSCGMSMYSCQLPSDVIWAPTARPPPPY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00010 292 MobiDBLite consensus disorder prediction 236 268 - -
Pral5518g00010 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 234 - -
Pral5518g00010 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 283 IPR014476 GO:0003680
Pral5518g00010 292 MobiDBLite consensus disorder prediction 1 102 - -
Pral5518g00010 292 Gene3D - 105 240 - -
Pral5518g00010 292 ProSiteProfiles PPC domain profile profile. 102 243 IPR005175 -
Pral5518g00010 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 224 IPR005175 -
Pral5518g00010 292 FunFam AT-hook motif nuclear-localized protein 106 241 - -
Pral5518g00010 292 CDD DUF296 108 222 IPR005175 -
Pral5518g00010 292 PIRSF ESCAROLA 13 283 IPR014476 GO:0003680
Pral5518g00010 292 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00010 Pral-Chr5518 48212 50166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00010 1 292 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.403 6.01e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00010 - - qsa:O6P43_015380 371.703