Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00155 ATGAACGACTTGTTCTCTGGCTCCTTCTCTCGCTTCCGTAGCGAGCAATCGTCGCCTGACCATCATCAACACCATGACATCGAGATGGGTTCTGTCATGGCCTCCATTGGCGGCGGCGGCGATCTCAACAAGTTCTTCGAGGAAGTAGAATCTATAAAGGACGAGCTTAAAGAGCTGGAAAGACTGAACCAGAATTTGCAGAGCTCTCACGAGCAGAGCAAGACCCTTCACAATGCCAAGGCCGTCAAGGACCTTCGCTCTCGAATGGACAGCGACGTTGCTCTTGCTCTTAAGAAGGCGAAGCTCATCAAGATCAAACTGGAGGCACTGGAGCGATCCAACGCCGCCAGCCGGAGCCTTCCCGATTGTGGACCCGGCTCGTCATCGGACCGGACACGGACATCTGTGGTGAACGGTTTGAGGAAGAACCTGAAGGACTGCATGGACAGTTTCAATGAACTCAGACAGCGAATCTCCGTCGAGTACCGGGAGACCGTGCAGCGCAGGTATTTCACGGTCACCGGAGAGAATCCCGACGAGAAGACCGTCGACCTCCTGATTTCTACAGGTGAGAGCGAAACGTTTCTTAGGAAAGCCATCCTGGAGCAAGGCAGGGGAAGAATACTGGACACCATCAATGAAATTCAAGAGAGGCACGATGCGGTGAAAGATTTGGAGAAGAATCTGCAGGAGTTGCATCAAGTGTTCCTGGACATGGCAGTGCTGGTGCAATCCCAAGGCGAGCAATTGGATGATATTGAGAGCCATGTGGCGAGAGCCAGCTCGTTTGTTAAGAGGGGAAACCAGAACCTACAGACAGCAAGGAAGCACCAGAAAAACACCAGGAAATGGACCTGTTATGCTATTATTCTTCTGCTTGTGATTATCTTGTTCGTCGTGCTATTCACTGTGAGGCCGTGGGAAAATACTGGTGGCAGTTCTTCATCATCACCGCAAACACCTGTACCACCACCGCCTCCTCCTCCTTCGGCTTAA 996 0.5191 MNDLFSGSFSRFRSEQSSPDHHQHHDIEMGSVMASIGGGGDLNKFFEEVESIKDELKELERLNQNLQSSHEQSKTLHNAKAVKDLRSRMDSDVALALKKAKLIKIKLEALERSNAASRSLPDCGPGSSSDRTRTSVVNGLRKNLKDCMDSFNELRQRISVEYRETVQRRYFTVTGENPDEKTVDLLISTGESETFLRKAILEQGRGRILDTINEIQERHDAVKDLEKNLQELHQVFLDMAVLVQSQGEQLDDIESHVARASSFVKRGNQNLQTARKHQKNTRKWTCYAIILLLVIILFVVLFTVRPWENTGGSSSSSPQTPVPPPPPPPSA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00155 331 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 39 169 - -
Pral5517g00155 331 CDD SNARE_syntaxin1-like 211 273 - -
Pral5517g00155 331 Coils Coil 137 157 - -
Pral5517g00155 331 SUPERFAMILY t-snare proteins 40 267 IPR010989 GO:0016020|GO:0016192
Pral5517g00155 331 Gene3D - 209 305 - -
Pral5517g00155 331 SMART SynN_4 37 163 IPR006011 GO:0016020
Pral5517g00155 331 MobiDBLite consensus disorder prediction 309 331 - -
Pral5517g00155 331 Gene3D - 40 172 - -
Pral5517g00155 331 Coils Coil 212 235 - -
Pral5517g00155 331 ProSitePatterns Syntaxin / epimorphin family signature. 218 257 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pral5517g00155 331 MobiDBLite consensus disorder prediction 1 24 - -
Pral5517g00155 331 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 212 274 IPR000727 -
Pral5517g00155 331 Pfam SNARE domain 248 300 IPR000727 -
Pral5517g00155 331 FunFam Syntaxin 132 205 305 - -
Pral5517g00155 331 PANTHER SYNTAXIN 58 296 IPR045242 -
Pral5517g00155 331 Pfam Syntaxin 44 247 IPR006011 GO:0016020
Pral5517g00155 331 SMART tSNARE_6 207 274 IPR000727 -
Pral5517g00155 331 CDD SynN 42 199 IPR006011 GO:0016020
Pral5517g00155 331 Coils Coil 42 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00155 Pral-Chr5517 703890 705601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00155 34 327 SNARE and Associated Proteins AT3G11820 71.711 5.35e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00155 K08486 - gmx:100809258 479.174