Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00150 ATGAAGGAGGCAACAGGTTCAGGTGGGTTCATAGCGTCAGGATTCTGGTATTTCGTTGGAGTTTCCTTTGGAGTTCTGGTTATCATCACAGCCCTCACCATTGTTTCCTACTTATGCGCTCGCTCACGCATTCCTATTACTTTGCCTCTGTATAGGATTAATGCTCTTGATCAATCCGTGGATGATGATGTGCAGGGCATAGATGAGGCCACCATTTTGAGCTACCCCAAGCTGCTATTTTGTGAGGCCAGACACAGGGACTCAGAACAATCCCACGCCGCCACGTGTTGCTCTATATGTTTGTCGGATTATAAAGACACTGATGTGGTCAGGATGCTACCTGAATGTGGCCACCTCTTCCATGTCCAATGCATAGACACTTGGCTTAGAATGCAGCCCACCTGCCCTAATTGCCGTACATCTCCCTTCTCAACGCCTCCGGCTCAAGTGGTGTTTCCCTCCCCCGCCCACACGCCGTCTTAG 483 0.501 MKEATGSGGFIASGFWYFVGVSFGVLVIITALTIVSYLCARSRIPITLPLYRINALDQSVDDDVQGIDEATILSYPKLLFCEARHRDSEQSHAATCCSICLSDYKDTDVVRMLPECGHLFHVQCIDTWLRMQPTCPNCRTSPFSTPPAQVVFPSPAHTPS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00150 160 SMART ring_2 97 138 IPR001841 -
Pral5517g00150 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 143 IPR013083 -
Pral5517g00150 160 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 147 IPR045899 -
Pral5517g00150 160 CDD RING-H2_EL5-like 96 139 - -
Pral5517g00150 160 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Pral5517g00150 160 SUPERFAMILY RING/U-box 96 144 - -
Pral5517g00150 160 Pfam Ring finger domain 97 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00150 Pral-Chr5517 666584 667066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00150 14 159 C3H Transcription Factor Family AT5G06490 42.941 8.91e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00150 - - rvl:131313490 163.31