Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00140 ATGGAGGAATCAACACTACCCCAGCCGGTGAAGCTGAGGCATACGGAAGAGGGTGGACCGATTCCGACGAGCGTACGAAATGAAGAGATTATTCAACAAGTGGAACCTACAAAACAAAAGAAGCCCCGCAAGATGAAAAGGTTTGCATCGGCTGGGCTGCAAGCAGATTCTGTTTTGCAAACAAAAACTGGTCATCTTAAGGAGCTCTATAAACTGGGACGAAAACTTGGACATGGGCAATTTGGAACGAGTTTCCTTTGCATGGAGAAAGCTACAGGTAAAGAGTATGCCTGCAAGTCCATTGCAAAGCGAAAGTTGCTGACATATGAAGATGTCGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTAGCCGGATGCCCAAATGTGATATCTATAAAAGGGGCTTATGAGGATCCTGTGGCAGTTCATGTTGTGATGGAACTATGTGCAGGGGGTGAGCTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGTTAGTGTTATAGAAGCTTGTCACTCCCTTGGAGTCATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTCAGTAAGGATGAAGACTCTCCCCTTAAGGCTATAGATTTTGGATTGTCTACGTTTTTCAAACCAGGGGAAACTTTCACAGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTGCAAATGTTATGGTCCAGAAGCAGACGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGGGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCAAAGAGGTTTTGGATGGGAAGCTTGATTTCTCATCAGATCCTTGGCCTAAAATCTCAGACAGTGCTAAAGACTTAGTGAGGAGGATGCTTACTAGAGATCCGAGAAAACGGATAACTGCTCATGAAGTTCTTTGTCATCCTTGGATACGAGTTAATGGAGAAGCTCCAGATAAACCTCTTGATTCAGCAGTCTTGAGTCGCCTGAAGCAGTTTTCTGCCATGAATAAGCTCGAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCCGAAGAAGAAATTGCTGGATTGAAAGAAATTTTTAAGATCATCGACGCAGACAACAGTGGTCAAATTACATTCGAAGAACTAAAGAATGGACTGAGAAGATTTGGTGCTGATCTGAATGAATCGGAAATACATGATCTAATGCAAGCCGCAGATGTTGATAACAGTGGAACAATTGACTACAAAGAATTCATAGCTGCCACATTGCATTTAAATAAAATTGAGAGGGAAGACCACCTGTTTGCAGCCTTCTCATACTTCGATAAAGATGGAAGCGGGTATATCACACCAGATGAGCTCCAACAAGCTTGCCAAGAATTTGGCATGGAAGAAATCCACTTAGAAGAAATTATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAGGAATTTGTGGCAATGATGCAGAGAGGCAAGACAGAGATGGGGAAAAAGGGTGAAAGGGGTAGCAATAGATTTAAGATTGGATATAGAGAGGCTCTGTCAGTGTATTAA 1608 0.4254 MEESTLPQPVKLRHTEEGGPIPTSVRNEEIIQQVEPTKQKKPRKMKRFASAGLQADSVLQTKTGHLKELYKLGRKLGHGQFGTSFLCMEKATGKEYACKSIAKRKLLTYEDVEDVRREIQIMHHLAGCPNVISIKGAYEDPVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVSKDEDSPLKAIDFGLSTFFKPGETFTDVVGSPYYVAPEVLCKCYGPEADVWSAGVMIYILLCGVPPFWAETEEDIFKEVLDGKLDFSSDPWPKISDSAKDLVRRMLTRDPRKRITAHEVLCHPWIRVNGEAPDKPLDSAVLSRLKQFSAMNKLEKMAIRVIAEKLSEEEIAGLKEIFKIIDADNSGQITFEELKNGLRRFGADLNESEIHDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITPDELQQACQEFGMEEIHLEEIIREADQDNDGQIDYKEFVAMMQRGKTEMGKKGERGSNRFKIGYREALSVY 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00140 535 Gene3D Transferase(Phosphotransferase) domain 1 156 352 - -
Pral5517g00140 535 Gene3D Phosphorylase Kinase; domain 1 72 155 - -
Pral5517g00140 535 ProSiteProfiles EF-hand calcium-binding domain profile. 481 512 IPR002048 GO:0005509
Pral5517g00140 535 SMART efh_1 447 475 IPR002048 GO:0005509
Pral5517g00140 535 SMART efh_1 375 403 IPR002048 GO:0005509
Pral5517g00140 535 SMART efh_1 481 509 IPR002048 GO:0005509
Pral5517g00140 535 SMART efh_1 411 439 IPR002048 GO:0005509
Pral5517g00140 535 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Pral5517g00140 535 CDD EFh 447 507 IPR002048 GO:0005509
Pral5517g00140 535 CDD STKc_CAMK 70 327 - -
Pral5517g00140 535 ProSiteProfiles Protein kinase domain profile. 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5517g00140 535 Pfam Protein kinase domain 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5517g00140 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 60 502 - -
Pral5517g00140 535 Pfam EF-hand domain pair 388 438 IPR002048 GO:0005509
Pral5517g00140 535 Gene3D - 353 511 - -
Pral5517g00140 535 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
Pral5517g00140 535 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
Pral5517g00140 535 MobiDBLite consensus disorder prediction 1 24 - -
Pral5517g00140 535 FunFam Calcium-dependent protein kinase 1 72 155 - -
Pral5517g00140 535 SMART serkin_6 70 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5517g00140 535 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Pral5517g00140 535 SUPERFAMILY EF-hand 367 508 IPR011992 -
Pral5517g00140 535 FunFam Calcium-dependent protein kinase SK5 156 340 - -
Pral5517g00140 535 FunFam Calcium-dependent protein kinase 1 336 510 - -
Pral5517g00140 535 CDD EFh 376 435 IPR002048 GO:0005509
Pral5517g00140 535 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Pral5517g00140 535 Pfam EF-hand domain pair 446 507 IPR002048 GO:0005509
Pral5517g00140 535 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Pral5517g00140 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Pral5517g00140 535 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Pral5517g00140 535 SUPERFAMILY Protein kinase-like (PK-like) 70 329 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00140 Pral-Chr5517 611795 614493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00140 40 509 EF-hand Containing Proteins AT3G10660 80.213 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral5517g00140 Pkinase 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00140 K13412 - qsa:O6P43_009396 848.195