Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00129 ATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATTACTGGTTCTGTGAATCCAGGTGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTGGGAGGGCGATTGATTCAGTCCACTGCTGGAGGTTCTATCACTTACAATGACCAGCCATATAGCAAATATCTCAAAAGCAAGATAGGGTTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTAAAAGAAACACTTACGTACTCAGCCCGTCTGCGACTCCCTGATACATTCACTAAGGACCAGAAGGAAAAACGAGCCTTGGATGTCATCTATGAGCTTGGCTTAGATAGATGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCTGGAGGAGAGAGGAAAAGGGTTTGCATTGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAGCCAACTTCTGGTTTGGATTCTACGACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACGGTGGTGACAACAATTCACCAGCCATCAAGCAGATTATTTCACAAATTTGATAAGTTGATCCTACTGGGAAAAGGCAGCTTGCTTTACTTTGGCAAAGCATCTGAAGCAATGCCTTATTTCCAATCCATAGGATGCTCCCCTCTTATTGCCATGAACCCTGCAGAATTTTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTACCTTCTGAGTTAGAGGATAAAGTGCAGATGGAAAATGCAGAAGTCAAAACAAAGAATGGGAAGCCATCACCAGCGATGGTACAAGAGTATCTAGTACAAGCATACAAGACTCGAGTTTCTGAAACAGAGAAGAGAAAGCTAATGGTGCCCATCCCTCTTGATGAATCACTGAAGTCTAAGGTTTGTTCTCCTAGAAGACAGTGGGGGACAAGGTGGTGTGAGCAGTATTCCATACTGTTTTGTAGAGGAGTAAAAGAACGGAGGCACGACTACTTCAGCTGGTTAAGAATCACACAAGTTCTCTCTACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAACAATCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCCGTGTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGGGCAGTTGACATGTACAGGCTAAGTGCATACTTTGTGGCTAGGACTACAAGTGATGTTCCACTGGACTTAATACTGCCAGTACTGTTCCTGCTGGTTGTTTATTTCATGGCCGGTCTGAGACTAAGTGCCGAGTCATTTTTCTACAGCATTCTCACTGTCTTCCTCTGCATTGTGGCGGCTCAGGGGCTTGGACTCGCTATTGGGGCCACACTAATGGACTTGAAGAAAGCAACAACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTGGCCGGAGGATTTTTCGTAAAGGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCGTTTAACTACCACACATACAAACTTTTGCTCAAAGTGCAATACGGAGGCCTCTCGAGAGGCATAAATGGGATGAGAATTGACGATGGTTGGACAGAGGTCGGTGCTCTGATAGCAATGGTTTTTGGTTATCGTTTATTAGCCTACCTTTCGTTGCGGCGGATGAAGCTTCCATGCGGAGCTTAG 1752 0.4458 MTTSEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYSARLRLPDTFTKDQKEKRALDVIYELGLDRCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMENAEVKTKNGKPSPAMVQEYLVQAYKTRVSETEKRKLMVPIPLDESLKSKVCSPRRQWGTRWCEQYSILFCRGVKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSAESFFYSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRGINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00129 583 Pfam ABC-2 type transporter 329 537 IPR013525 GO:0016020|GO:0140359
Pral5517g00129 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 225 IPR027417 -
Pral5517g00129 583 ProSitePatterns ABC transporters family signature. 133 147 IPR017871 GO:0005524|GO:0016887
Pral5517g00129 583 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 233 IPR003439 GO:0005524
Pral5517g00129 583 Pfam ABC transporter 10 161 IPR003439 GO:0005524
Pral5517g00129 583 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 571 - -
Pral5517g00129 583 Pfam ABC-2 type transporter 190 291 IPR043926 GO:0140359
Pral5517g00129 583 Gene3D - 2 227 IPR027417 -
Pral5517g00129 583 FunFam ABC transporter G family member 22 1 227 - -
Pral5517g00129 583 SMART AAA_5 19 210 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00129 Pral-Chr5517 580131 583081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00129 9 273 Calmodulin-binding Proteins AT2G36910 28.044 1.51e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00129 K05681 - gmx:100798801 1013.83