Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00127 ATGGAGAAGACAAATTCGTGTGGGTTGGCGAGGACGAAATCGGAGCAGCTAGTGGAGACGGTGGTGGCGGCGCTGAAGCCGGCGACGTCGAGCGATTCGATGAACGGGATGATGGATAGTGGGGGAAGCGGAGGAACACTGTCGAGGAAGTCAAGTAGGAGGATGTCGCCGGGAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGATGAAGTGGGCAGCGGCGCCGCCCTCAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACGCTCACTCCTGATGAAATCACTGACTCTAAGCCATTCAGAGACCAAGACATTCGATTGCATATGTATATTGCAGCGGAGGATATTGAAGCGGGAACTTGCCACCTCAAGTTTCAAACGGAACCCACCTTGCCTATTTTTCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATTACTGGTTCTGTGAATCCAGGTGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTGGGAGGGCGATTGATTCAGTCCACTGCTGGAGGTTCTATCACTTACAATGACCAGCCATATAGCAAATATCTCAAAAGCAAGATAGGGTTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTAAAAGAAACACTTACGTACTCAGCCCGTCTGCGACTCCCTGATACATTCACTAAGGACCAGAAGGAAAAACGAGCCTTGGATGTCATCTATGAGCTTGGCTTAGATAGATGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCTGGAGGAGAGAGGAAAAGGGTTTGCATTGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAGCCAACTTCTGGTTTGGATTCTACGACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACGGTGGTGACAACAATTCACCAGCCATCAAGCAGATTATTTCACAAATTTGATAAGTTGATCCTACTGGGAAAAGGCAGCTTGCTTTACTTTGGCAAAGCATCTGAAGCAATGCCTTATTTCCAATCCATAGGATGCTCCCCTCTTATTGCCATGAACCCTGCAGAATTTTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTACCTTCTGAGTTAGAGGATAAAGTGCAGATGGAAAATGCAGAAGTCAAAACAAAGAATGGGAAGCCATCACCAGCGATGGTACAAGAGTATCTAGTACAAGCATACAAGACTCGAGTTTCTGAAACAGAGAAGAGAAAGCTAATGGTGCCCATCCCTCTTGATGAATCACTGAAGTCTAAGGTTTGTTCTCCTAGAAGACAGTGGGGGACAAGGTGGTGTGAGCAGTATTCCATACTGTTTTGTAGAGGAGTAAAAGAACGGAGGCACGACTACTTCAGCTGGTTAAGAATCACACAAGTTCTCTCTACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAACAATCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCCGTGTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGGGCAGTTGACATGTACAGGCTAAGTGCATACTTTGTGGCTAGGACTACAAGTGATGTTCCACTGGACTTAATACTGCCAGTACTGTTCCTGCTGGTTGTTTATTTCATGGCCGGTCTGAGACTAAGTGCCGAGTCATTTTTCTACAGCATTCTCACTGTCTTCCTCTGCATTGTGGCGGCTCAGGGGCTTGGACTCGCTATTGGGGCCACACTAATGGACTTGAAGAAAGCAACAACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTGGCCGGAGGATTTTTCGTAAAGGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCGTTTAACTACCACACATACAAACTTTTGCTCAAAGTGCAATACGGAGGCCTCTCGAGAGGCATAAATGGGATGAGAATTGACGATGGTTGGACAGAGGTCGGTGCTCTGATAGCAATGGTTTTTGGTTATCGTTTATTAGCCTACCTTTCGTTGCGGCGGATGAAGCTTCCATGCGGAGCTTAG 2241 0.4659 MEKTNSCGLARTKSEQLVETVVAALKPATSSDSMNGMMDSGGSGGTLSRKSSRRMSPGGKNSHIRKSRSAQIKVDLDEVGSGAALSRASSASLGLSFSFTGFTLTPDEITDSKPFRDQDIRLHMYIAAEDIEAGTCHLKFQTEPTLPIFLKFKDVSYKVVIKGMTTSEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYSARLRLPDTFTKDQKEKRALDVIYELGLDRCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMENAEVKTKNGKPSPAMVQEYLVQAYKTRVSETEKRKLMVPIPLDESLKSKVCSPRRQWGTRWCEQYSILFCRGVKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSAESFFYSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRGINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGA 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00127 746 CDD ABCG_EPDR 147 378 - -
Pral5517g00127 746 MobiDBLite consensus disorder prediction 26 65 - -
Pral5517g00127 746 SMART AAA_5 182 373 IPR003593 GO:0016887
Pral5517g00127 746 ProSitePatterns ABC transporters family signature. 296 310 IPR017871 GO:0005524|GO:0016887
Pral5517g00127 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 103 734 - -
Pral5517g00127 746 FunFam ABC transporter G family member 22 160 390 - -
Pral5517g00127 746 Gene3D - 149 389 IPR027417 -
Pral5517g00127 746 Pfam ABC transporter 173 324 IPR003439 GO:0005524
Pral5517g00127 746 MobiDBLite consensus disorder prediction 26 69 - -
Pral5517g00127 746 Pfam ABC-2 type transporter 492 700 IPR013525 GO:0016020|GO:0140359
Pral5517g00127 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 388 IPR027417 -
Pral5517g00127 746 Pfam ABC-2 type transporter 353 451 IPR043926 GO:0140359
Pral5517g00127 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 396 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00127 Pral-Chr5517 575268 583081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00127 172 410 Calmodulin-binding Proteins AT2G36910 28.980 5.51e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00127 K05681 - gmx:100798801 1162.9