Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00092 ATGTCTCAGTTACTGTGTAAGCGTTGGAGCAGGTTGGTTACATCACTCAGAACAGCAAATTGTGGGAAGAGAGTTCAACTCTCGGCATTGACCTTTTCCACCAGCTCTGCCGAGCGTGACAGTCCGAGTCGATCCAGTCCGCCTCCAATTCGAGTGGGTTTTACCGAGTCAGCTGGGCGTGGTGTATTTGCCACTCGAGCAATCGGAGCCGGAGATCTCATCCATACTGCCAAACCCTTTCTGAGCCACCCTCCTCCCTCTGTTATCCACACTGTCTGTTATTTTTGCCTCAGAAAGCTCCGAAATTCGAGCCAACCTGAAGATGCAGGCGTATCATTTTGCAGTGAAGAATGCAAAGAACGTTCTAAGGAGTTTTATGATGTTGAGATGAAAGCGAATTGGATGGCTTTTGATGATTATTGCCGGACCCACGGTTTGAAATATCCATTTCTGGTAAAACGGTTGGCTTGCATGATCATATCAGGAGTTGCTAGTGTAGACAGTCTTGACATACTTCAACCTGCCAGCTTGACTCCTGAGATGATATTTGAGTTGGAAGAGGGTTTTGCCTTGTTTAGGAACGCCTTCACGAAGACACTTATTGCAGATGAAGATATTGCTTTTCTAAGCAAGCAATGGTACATTAGTGTCCTGGCCCGAATTCGTATTAATGCATTTCGAGTTGAACTGGCTGGAGTCTTGTATGAAGACCTGCTATCATCTGCAGTTGCATCTGTAGAAGCCGAAGCTGCTGTTGGAAATGCTGTCTACATACTTCCATCATTCTACAACCATGACTGTGATCCTAATGCACACATGATATGGATAGATAATGCCGATGCAAAACTGAAGGCCCTCCGTAACGTTGAAGAAGGCGAAGAACTAAGAATCTGCTACATTGATGCCAGCCTGGACCGTTATGCTCGGCAAGAACTTTTGCTTCAAGGTTTTGGTTTTCAATGCATTTGTAATAGATGCTTACAAGGCGACTAA 993 0.4532 MSQLLCKRWSRLVTSLRTANCGKRVQLSALTFSTSSAERDSPSRSSPPPIRVGFTESAGRGVFATRAIGAGDLIHTAKPFLSHPPPSVIHTVCYFCLRKLRNSSQPEDAGVSFCSEECKERSKEFYDVEMKANWMAFDDYCRTHGLKYPFLVKRLACMIISGVASVDSLDILQPASLTPEMIFELEEGFALFRNAFTKTLIADEDIAFLSKQWYISVLARIRINAFRVELAGVLYEDLLSSAVASVEAEAAVGNAVYILPSFYNHDCDPNAHMIWIDNADAKLKALRNVEEGEELRICYIDASLDRYARQELLLQGFGFQCICNRCLQGD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00092 330 CDD SET_SMYD 253 326 - -
Pral5517g00092 330 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 328 - -
Pral5517g00092 330 ProSiteProfiles SET domain profile. 48 300 IPR001214 GO:0005515
Pral5517g00092 330 Gene3D - 144 225 - -
Pral5517g00092 330 Gene3D SET domain 61 326 IPR046341 -
Pral5517g00092 330 SMART set_7 48 306 IPR001214 GO:0005515
Pral5517g00092 330 Pfam SET domain 59 299 IPR001214 GO:0005515
Pral5517g00092 330 Gene3D - 92 143 - -
Pral5517g00092 330 SUPERFAMILY SET domain 47 326 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00092 Pral-Chr5517 456204 459633 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5517g00092 SET 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00092 - - pcin:129308775 531.946