Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00077 ATGGACAAGTCGGACAGAGAGACTCATGACTTCATGAACGTTCAGTCTTTCTCGCAGCTCCCTTTTATCCGTCCTCCTCCTCTCAAAGAGAAGCCTGTTAAGCTTTTCGGCATTGAATTCCCCAACGCCGACTCTCCTTCTGCCGCCGATGATGCCCACTCCTCCGACGCTACCACCGCCAACAATAATGCTTTTGATCTCGATTCCAAGGACGCCGCCGCCGCCGCCGACAACGCTGAAACTAGCCGCCGATTCGAATGCCATTACTGTTGTAGAAACTTCCCCACCTCTCAAGCCTTAGGTGGCCACCAAAACGCTCATAAACGGGAGCGTCAGCACGCCAAGCGAGCCCACCTTCAGTCCGCCATGGGGCACAATGGCCCGTCCGTCGACGCCGCCTCTCATGTCTATGGCCTCATGAACTACCGGCTCGGCTCTGCCCCGTACCCCCCGTGGCATAATAGTAACTCTGCCGGTGGCAGGTTTTATGGAAGCCATAGCGCGACCTCATATCCTCATCTGCAACCCATCAACGGTAGCCCCTTAGCCTTGTGGCGGATCCCCGCCACCGTCCAAAATAACCCTACTACTTTCAACCGCGACCGTTCGTTGCACTTACAGCATTCGTTGCCCTTGCTTGCCGGCGACGAAATTAATGCGGGGGCTTCTCATCAGGTCGCTGGTTCCGCTTCGCAGAATCGCCTTGTTTATGACTCTAAACCCGGCGTTCACGACCATGTGAGTTTGGATCTTCACCTGTGA 762 0.5551 MDKSDRETHDFMNVQSFSQLPFIRPPPLKEKPVKLFGIEFPNADSPSAADDAHSSDATTANNNAFDLDSKDAAAAADNAETSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMGHNGPSVDAASHVYGLMNYRLGSAPYPPWHNSNSAGGRFYGSHSATSYPHLQPINGSPLALWRIPATVQNNPTTFNRDRSLHLQHSLPLLAGDEINAGASHQVAGSASQNRLVYDSKPGVHDHVSLDLHL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00077 253 Pfam C2H2-type zinc finger 84 109 - -
Pral5517g00077 253 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Pral5517g00077 253 SUPERFAMILY beta-beta-alpha zinc fingers 82 113 IPR036236 -
Pral5517g00077 253 Gene3D Classic Zinc Finger 64 133 - -
Pral5517g00077 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Pral5517g00077 253 PANTHER ZINC FINGER PROTEIN GIS 1 253 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00077 Pral-Chr5517 373250 374451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00077 1 253 C2H2 Transcription Factor Family AT3G58070 42.007 5.98e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00077 - - cave:132192149 293.508