Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00065 ATGTTGTGCTGCGGAGGTACAGAGGAAGAGAGCAGCGGCCCAACTGCAAACCAAAACCCTGCACCACTCAGAGGTGGTAATGCGTATGGAGAAGGGGGTGACAGAGGAGAGCCAAAAAGCAATGTTGTGAAGGCTGGCGCTCCCCAAAAAGTATTGCCAATTGAGACCCCTGCAATACCATTGGAGGAGTTAAATAGGTTAACGGGCAACTTTGGCTCGAGCGCTTTGATTGGAGAAGGTTCGTACGGACGAGTCTTTTATGCCAAGTTAAGCGATGGTCAGGATGCAGCGATCAAGAAGCTGGATACCAGTGGTTCTTCTACACCAGAAGAAGATGCCGATTTTGCCGCTCAGCTATCTGTCGTTTCAAGACTGAAGCACGATCACTTTGTGGCGTTGATTGGGTATTGTTTGGAGTCAAGTAACAGAATTTTGGTTTATCAACATGCAAGTTTGGGTTCTTTGCACGATGTATTACATGGAAGAAAAGGTGTACAAGGGGCCGAACCAGGTCCAGTTCTGAGCTGGAACCAAAGAGCAAAGATCGCATTTGGGGCAGCAAAAGGCCTCGAGTTTCTTCATGAAAAGGTTCAACCTTCCATAGTCCACCGTGATATTAGGTCCAGCAATGTCTTACTGTTCGGTGACTATGATGCCAAGATTGCGGATTTCAGCTTGACCAGCCAGGGTTCTGACACAGCAGCTCGCCTGCATTCAACTAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAAAAAAGCGACGTTTACAGTTTCGGAGTAGTTCTCTTAGAACTCTTGACAGGAAGAAAACCAGTAGACCACACAATGCCCAAAGGCCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTGGATCCCAAACTCAACAATGAGTACCCGCCAAAGGCAATTGCTAAGCTGGCGGCGGTGGCAGCATTGTGTGTTCAGTATGAGGCTGACTTCCGGCCCAACATGACCATTGTGGTGAAAGCTTTGCAGCCACTTCTGAATGCAAAACCAGCTGGCCCAGAACCAAGCGCTTAA 1101 0.485 MLCCGGTEEESSGPTANQNPAPLRGGNAYGEGGDRGEPKSNVVKAGAPQKVLPIETPAIPLEELNRLTGNFGSSALIGEGSYGRVFYAKLSDGQDAAIKKLDTSGSSTPEEDADFAAQLSVVSRLKHDHFVALIGYCLESSNRILVYQHASLGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDIRSSNVLLFGDYDAKIADFSLTSQGSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPEPSA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00065 366 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5517g00065 366 PIRSF ILK 35 359 - -
Pral5517g00065 366 SMART tyrkin_6 71 351 IPR020635 GO:0004713|GO:0006468
Pral5517g00065 366 Gene3D Phosphorylase Kinase; domain 1 39 149 - -
Pral5517g00065 366 FunFam Pti1 kinase-like protein 47 149 - -
Pral5517g00065 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Pral5517g00065 366 Gene3D Transferase(Phosphotransferase) domain 1 151 360 - -
Pral5517g00065 366 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672|GO:0006468
Pral5517g00065 366 MobiDBLite consensus disorder prediction 1 39 - -
Pral5517g00065 366 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Pral5517g00065 366 FunFam PTI1-like tyrosine-protein kinase 3 151 360 - -
Pral5517g00065 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Pral5517g00065 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00065 Pral-Chr5517 304753 307384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00065 46 365 Receptor kinase-like Gene Family AT3G58690 45.062 1.02e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral5517g00065 PK_Tyr_Ser-Thr 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00065 - - gmx:100786291 638.647