Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00020 ATGAGGGAAGGTGAGGAGGAGAGCAGAAACGGAACTCAGGGGGAAGAACAAGATGAAGACTACATGGGGGATCTCTCTCAGTTTCTTCCTTCAGAAGCGTTTGGTCCTTCTGAATCTTTTCCTGGAAAGAGCTCTGACAAGAAAGCCACAACGATCAACTCTTCCAAAAAGCAGTTGAAAAATCTCAGTTGGCAAGAACGAAGAAAACTTGAAAGACAAAAAAAGCAACAAGAAGAAGATGAGCAAACATTGGCAAAAGTGGAAGCTCCGATTCCACAATCAAATATTGGATTTAAGCTGCTCAAACAAATGGGTTATACGCCAGGCTCTGCCCTTGGAAAGGAGGGTTCAGGCAGGGCTGAACCTGTAGGACTTGCTATTCGACGGTCACGAGCTGGTATAGGACTAGATGATCCCCACAAGGAGAAGAGGAAAAGGGAGGAGATGAAGGTGGAGAGGAAAAAGAGGAAAGAAGAGGCACTGATGGAAGAATTTGGGTTTAGGCAGAAGTCACATTGGCAGAGTAGGAAAATTGTAAGCAATTTCAAGAAGGCAAAGGCTGCTCTTGACCAGTTAGAGAACAGGGAAGTTATACCACAAAAGAATGAGGAGGAGGAGGGTGATGTTGATGAAGAGAATGAGGAAGAAATAACAGAAGAGGATTTACAGGATGTTCTGATGGAACTGAGGGATGAGCATCAGTATTGCCTCTTTTGTGGGTGTAAGTATGAATCAAATGATGCTCTTTTGGCTAACTGCCCTGGGCCCAATGAAGATGACCACTGA 786 0.4453 MREGEEESRNGTQGEEQDEDYMGDLSQFLPSEAFGPSESFPGKSSDKKATTINSSKKQLKNLSWQERRKLERQKKQQEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRAEPVGLAIRRSRAGIGLDDPHKEKRKREEMKVERKKRKEEALMEEFGFRQKSHWQSRKIVSNFKKAKAALDQLENREVIPQKNEEEEGDVDEENEEEITEEDLQDVLMELRDEHQYCLFCGCKYESNDALLANCPGPNEDDH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00020 261 ProSiteProfiles G-patch domain profile. 93 139 IPR000467 GO:0003676
Pral5517g00020 261 Pfam G-patch domain 93 136 IPR000467 GO:0003676
Pral5517g00020 261 PANTHER UNCHARACTERIZED 16 261 IPR039249 -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 133 156 - -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 130 156 - -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 1 91 - -
Pral5517g00020 261 Coils Coil 144 164 - -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 194 221 - -
Pral5517g00020 261 Coils Coil 175 195 - -
Pral5517g00020 261 SMART G-patch_5 91 137 IPR000467 GO:0003676
Pral5517g00020 261 MobiDBLite consensus disorder prediction 43 60 - -
Pral5517g00020 261 Coils Coil 67 87 - -
Pral5517g00020 261 Pfam Domain of unknown function (DUF4187) 211 261 IPR025239 -
Pral5517g00020 261 SMART DUF4187_2 204 261 IPR025239 -
Pral5517g00020 261 Coils Coil 212 232 - -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 203 221 - -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 1 16 - -
Pral5517g00020 261 MobiDBLite consensus disorder prediction 61 85 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00020 85 135 C2H2 Transcription Factor Family AT5G26610 43.137 7.48e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00020 - - pcin:129285792 386.341