Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00019 ATGGCATTCTTTCCAGGAAAGAAACCAGTACACTTCACCAGTACGCTTATTATTGAGAAAATGGTTTACAAGCGCCACTATATGCATCTCATTATCATTGTCTTCTCGGCAATTTTGACTTCCCGGGGTTCCGCGTCTACTGATCCGGCTGACGTCACAGCTCTCCGAGACCTATACAAGGCATTGAACCGGCCGCCGGTATTGGAGAATTGGAGTCTTGGAGATCCTTGTGAGGAATCTTGGACAGGAGTAGCATGTTCTGGGTCGTCAGTCATACACCTCAACATTCAAGGATTCAATCTCACAGGACATCTCGGAAGCCAGCTCCATAATCTACATAATTTGAAGATGATTGATGTCAGCTCCAATAACATAGCAGGGGAGATACCATTCGGCTTGCCCCCGAACGCCACACATATGAATCTGAGCCACAATTTGTTATCTGGACCCATTGGCAATGTTTTTACAGGCCTAGATAATCTCATAGAGATGGACCTTTCATATAACACTTTCACCGGGGATCTGCCCAGTTCATTTGCTTCCTTGAAAAACCTTACTAGATTGTTCTTGCAAAATAATAACTTCACTGGATCAGTCACATATCTTGCTGACCTTCCACTTACAGATTTGAACATTCAAGGTAATCTATTTAGCGGCATTATTCCCCAGCATTTTCAGTCCATACCAAATTTATGGATCGGAAGCAATAGATTCCATGCAGAAGCCAATTCTCCTCCTTGGGTTTTTCCTTTGGATAGAGCACCAGTTGTATACAACTTTAGTCGCACGCCCACGACTCAGGCAAATGCCATCCAGAACCATTCATCTCGCAAAGTAAGTGGCCACAAGAAAAAACTTATGAGTGCTGGACAAGTAGCTTTTATGGTTGGTGGGGGAACGCTAATAGCTACCGGTGTAGCCCTCTTCATTGCAATCCGTTTGAATCGATTGAGTGAAAAGAGACTCAAAAGCTTTGAAAGCAGGCACAGCTCATTGCAATCTCATCCAACTAACGCAACCATAGAAACCTTTCCTACCGCGCCAGAAGAAAGCCCACGAACCCCGCCATTCAACTCTGCATCCCTTTTGGGTCCAAGGCTTTTGCCTCCCCTGCTCCATAACAGAGCAGAGGACACGTCAAGAAGAAGTTTTTCCAGAAGACGCAGATTCTCCGGAAGGACGAAAGTTTACTCAGTGGGAGAGCTTCAATTAGCTACAGACAGCTTCAGTGAAGGCAATTTTCTCGGGGAGGGATCCCTGGGTCCTGTTTACAGAGCTTTGTTTCCAAATGGCCAAACTCTGGCTTTGAAGATTATCAACATGGCGGGCCTGTCTTTCCACGAAGAGGAAACGTTTTTGGACGTCGTTTCCACCACTTCCCGTCTGAGGCACCCCTATATCGTTGCGCTTAATGGTTATTGTATGGAGCACGGGCAGCATCTTCTTGTTCACGACTATGTTAGAAGCTTAACTCTGGACGATGCTCTTCACAGTGACGCATACAAGCCTTTATCTTGGGTCCTCCGTCTCCGTATTGCCCTTGGTGTTGCTCAGGCTCTGAACTATTTGCACTCGACATTCTCCCCTCCTGTGGCCCACGGCAACCTGAAGGCTGCCAACATCCTTCTCGACGAAAATCTGACGCCCCGCGTCAGTGACTGTTGCCTAGCTATTTTGAGACCGCTAACGAGCAACAAAGTCAAAGGTTCTGAGCTTGCAACTGAAGACGCAGGCTACATTGCACCAGACCACGGCCAACCAGGAATTAGCAACACACGGAGTGACGTTTATGCCTTTGGGGTGTTGCTTCTGGAATTATTAACGGGACGGAAACCTTACGATGATTCGAGGCCAAGGGAGGAACAGTACCTTGGGAAATGGGCATCATCGAGGCTTCATGACAATGAGAGTTTGGAACAGATGGTGGATCCAGGAATTCAAGGGACTGTTTCAGCCAAAGCTCTTTCTCGTTATGCTGATATCGTCTCCCTCTGCATACAGCCCGTGAAGGAATTCCGACCTCCAATGTCGGAGGTGGTTGATTCTCTTATAATCTGTTCACAAAAGTTTAACAAGGTCATGTCCAGGAGTGGAGGTGCAGCAGCAGATATTTCCGACTTGGATCCCCTTGACAAGTCTTTCCGTTCAACCAATACTCGCTTTCTGGGTTCCCCCGCTTACAGCTACGTTTCCGCCTGA 2199 0.4716 MAFFPGKKPVHFTSTLIIEKMVYKRHYMHLIIIVFSAILTSRGSASTDPADVTALRDLYKALNRPPVLENWSLGDPCEESWTGVACSGSSVIHLNIQGFNLTGHLGSQLHNLHNLKMIDVSSNNIAGEIPFGLPPNATHMNLSHNLLSGPIGNVFTGLDNLIEMDLSYNTFTGDLPSSFASLKNLTRLFLQNNNFTGSVTYLADLPLTDLNIQGNLFSGIIPQHFQSIPNLWIGSNRFHAEANSPPWVFPLDRAPVVYNFSRTPTTQANAIQNHSSRKVSGHKKKLMSAGQVAFMVGGGTLIATGVALFIAIRLNRLSEKRLKSFESRHSSLQSHPTNATIETFPTAPEESPRTPPFNSASLLGPRLLPPLLHNRAEDTSRRSFSRRRRFSGRTKVYSVGELQLATDSFSEGNFLGEGSLGPVYRALFPNGQTLALKIINMAGLSFHEEETFLDVVSTTSRLRHPYIVALNGYCMEHGQHLLVHDYVRSLTLDDALHSDAYKPLSWVLRLRIALGVAQALNYLHSTFSPPVAHGNLKAANILLDENLTPRVSDCCLAILRPLTSNKVKGSELATEDAGYIAPDHGQPGISNTRSDVYAFGVLLLELLTGRKPYDDSRPREEQYLGKWASSRLHDNESLEQMVDPGIQGTVSAKALSRYADIVSLCIQPVKEFRPPMSEVVDSLIICSQKFNKVMSRSGGAAADISDLDPLDKSFRSTNTRFLGSPAYSYVSA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00019 732 SUPERFAMILY Protein kinase-like (PK-like) 383 686 IPR011009 -
Pral5517g00019 732 Gene3D Transferase(Phosphotransferase) domain 1 489 702 - -
Pral5517g00019 732 Pfam Protein tyrosine and serine/threonine kinase 412 683 IPR001245 GO:0004672|GO:0006468
Pral5517g00019 732 Gene3D Ribonuclease Inhibitor 48 277 IPR032675 -
Pral5517g00019 732 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 48 140 - -
Pral5517g00019 732 FunFam Leucine-rich repeat receptor-like protein kinase 487 694 - -
Pral5517g00019 732 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 141 249 - -
Pral5517g00019 732 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Pral5517g00019 732 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 683 IPR046959 -
Pral5517g00019 732 MobiDBLite consensus disorder prediction 329 358 - -
Pral5517g00019 732 SUPERFAMILY L domain-like 48 232 - -
Pral5517g00019 732 Gene3D Phosphorylase Kinase; domain 1 373 486 - -
Pral5517g00019 732 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 374 486 - -
Pral5517g00019 732 ProSiteProfiles Protein kinase domain profile. 409 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5517g00019 732 MobiDBLite consensus disorder prediction 328 360 - -
Pral5517g00019 732 Pfam Leucine rich repeat N-terminal domain 49 87 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00019 Pral-Chr5517 109682 114000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00019 21 732 Strubbelig Receptor Gene Family AT5G06820 52.830 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral5517g00019 PK_Tyr_Ser-Thr 4.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00019 - - gmx:100793182 961.829