Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5517g00006 ATGGAGATCAATAACATTCTAGGCTCCAACTACGCACTCTTGTTCATGATTTGGTTAGCCTCTCTCATATTGGTCCGGACCATGTTCTCTAAACAACCAAAAGCTAGGCTTCCTCCAGGTCCTTTGGCCTTACCCATCATAGGACACTTTTACCTTCTTCGATCACCCATGCATCAAGCTCTTCACAAGCTCTCGAGCCGTTATGGACCCATGATTCTCATCTACCTTGGTTCTGTTCCCTGGTTTGTTGTTTCTAGTTCTGAAATCGCGAAAGAGATATTGAAAACCCATGAAATTTCTTTCTGTAATCGACCATCCAGTTCTGCTCTCAGATATCTCACTTATAACGGAGCTGGTTTCATATTTGCACCTTATGGAGCTTACTGGAAGTTCATGAAGAAGCTTTGCATGTCGGAACTTTTTAATGGTCGCATGCTTGACCTACTCTTTCCTGCTAGGCAAGAGGAGATTCACCATTTCTTGCAGGTAATTCTGAAGAAAGCCCACACGGGAGAAGTTTTGGACGTGAGAGCTGAGCTTGTGAAGCTAGCAAACAGCATCGTAATGAGAATGGCACTTAACAAAAGTTTGTGTAACAACGACGAGGAGGCTCATGAGGTGGTGCAGGCCTTGAAAGAATCAGCCAAGGTCAGTGGAAGACTCTACTTATCAGATTATTTATGGCTTTTCAAATTCCTGGACCCCCAAGGAGTTTGGAAGAAGTTGAGGGAGGTACGTGAGAGGTCGGACGCTAGGTTCGAAAGCATCCTTCGAGAGCATGAACAAGAAAGAATTAAATCCAACAAGAAAGATGCACCAAAGGATATACTAGATCTTCTTCTCAATATATCAGAAGATCCAAGCTCAGAGGTCAGAATCACTAGGGACAACATCAAAGGCTTCCTGAAGGATATGTTTTCAGGGGGGACTGGTACGACAGCCGTGGGGGTAGAGTGGGCGGTGGCAGAACTGATAAACCACCCAAAAATAATGGAGAAAGCAAGGAAGGAGGTTGAGCGGGTGACTGGGAATGAAAGAATAGTAAACGAGTCGGATATAGTAAATCTTCCATATGTTCAAGCAATAGTAAAGGAGTCACTGAGGCTTCACCCTCCTGCTCCCATGTTCCTGAGAGAGTCAACTGAAAGCTGCAACATAGCAGGATATGAGATTCCGGCCAACAGTCGAGTGGTCATAAATATTTGGGCACTTGGGAGGGACCCAAAGTATTGGGATGATCCATTAGAGTTCAAGCCAGAAAGGTTCATGAGGGAAGATCAAAAAAGCCAGATGGAAGTGAGGGGACAGAACTATAATATCTTACCCTTTGGAAGTGGAAGAAGAGCCTGTCCTGGAGCTTCACTAGCACTCAATATTTTCCATGCCACTCTTGCTGCTATGATTCAGTGCTTTGAATGGAAACCTGCAGGAGGAGATGGAGAGAAGAACGCCATCAGTACTGTTGACATGCAAGAGGGAAGCTCTGCAAGTCTTCAAAGGGCCCACCCCCTCATTTGCATCCCAAAACCCAGACTCTTGCCATTTCCCTCCATGTGA 1557 0.4528 MEINNILGSNYALLFMIWLASLILVRTMFSKQPKARLPPGPLALPIIGHFYLLRSPMHQALHKLSSRYGPMILIYLGSVPWFVVSSSEIAKEILKTHEISFCNRPSSSALRYLTYNGAGFIFAPYGAYWKFMKKLCMSELFNGRMLDLLFPARQEEIHHFLQVILKKAHTGEVLDVRAELVKLANSIVMRMALNKSLCNNDEEAHEVVQALKESAKVSGRLYLSDYLWLFKFLDPQGVWKKLREVRERSDARFESILREHEQERIKSNKKDAPKDILDLLLNISEDPSSEVRITRDNIKGFLKDMFSGGTGTTAVGVEWAVAELINHPKIMEKARKEVERVTGNERIVNESDIVNLPYVQAIVKESLRLHPPAPMFLRESTESCNIAGYEIPANSRVVINIWALGRDPKYWDDPLEFKPERFMREDQKSQMEVRGQNYNILPFGSGRRACPGASLALNIFHATLAAMIQCFEWKPAGGDGEKNAISTVDMQEGSSASLQRAHPLICIPKPRLLPFPSM 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5517g00006 518 Pfam Cytochrome P450 38 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 CDD CYP93 69 508 - -
Pral5517g00006 518 PANTHER CYTOCHROME P450 98A9 13 512 - -
Pral5517g00006 518 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pral5517g00006 518 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 SUPERFAMILY Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5517g00006 518 FunFam Cytochrome P450 family protein 29 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5517g00006 Pral-Chr5517 42658 44552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5517g00006 11 508 Cytochrome P450 AT5G06900 45.129 8.10e-165 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5517g00006 K24188 - pcin:129302200 714.916