Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5516g00002 ATGGAATCGCGAGTGTTGTCACGCGCCACCGCCTTCTCCTCCTCCTCTCTCCCCTTCCTCCGCAGGCTCCCGCGCGACTCCCACGGTGCTTCCTTCCTCTCTGTCAAGCCGATCGGGGCCGTTGCCGACGGCGGCAATCTTATCTGGGGAAGGCAGCTCCGTCCCGAGCTATGCTCGCCGGCGCTGAGGAAAGACGCTCCCCTCCGGCCTTGCCTCGCCGCTGCCTCCTCTCCGGCTGAGGGAAGTGATTCCGCCGGGGAGGCGAAAGTGGCTCCGGTCGGGTTTTTCGATAAGTATCCGGCGCTGGTGACTGGATTCTTCTTCTTCATGTGGTACTTTTTGAATGTGATCTTTAACATCCTCAACAAGAAGATCTACAATTACTTCCCGTATCCATACTTTGTCTCGGTTATCCATTTATTCGTGGGCGTGGCGTACTGTCTTGTGAGCTGGGCCGTGGGCCTACCCAAGCGAGCTCCCATAGACTCGAACCTGCTGAAGGTGCTGATTCCTGTGGCAGTGTGTCACGCGCTAGGCCACGTGACCAGCAATGTGTCATTTGCAGCTGTTGCGGTTTCCTTCACACACACCGTTAAAGCTCTGGAGCCATTCTTCAATGCCGCTGCTTCCCAATTCATACTTGGCCAGCCAATTCCTTTTACCCTCTGGCTCTCTCTGGCTCCTGTTGTTATTGGTGTGTCAATGGCTTCACTGACTGAGCTCTCATTCAATTGGACTGGTTTTATAAGCGCTATGATTTCAAACATTTCATTCACATATCGCAGTATCTATTCAAAGAAGGCTATGACTGATATGGACAGTACAAATGTGTATGCCTACATTTCCATAATTGCCCTAATTGTCTGCATACCACCAGCCATAATTTTCGAGGGGCCTGCACTGATGAAGGGTGGTTTCAGTGATGCAATTGCTAAAGTTGGTACTGTCAAGTTCGTGTCAGATCTTTTCTGGGTCGGAATGTTTTACCACCTCTACAATCAGCTGGCCACCAACACTCTGGAGAGGGTGGCTCCTCTGACTCATGCAGTTGGGAATGTACTGAAACGTGTGTTTGTGATTGGCTTCTCAATCATAATCTTTGGCAACAAGATCTCCACCCAAACTGGTATTGGAACATGCATTGCAATAGCAGGAGTGGCCATCTATTCTTTCATCAAAGCCAAGATGGAAGAGGAGAAACGACAAGCGAAAGCGGCATAA 1221 0.5086 MESRVLSRATAFSSSSLPFLRRLPRDSHGASFLSVKPIGAVADGGNLIWGRQLRPELCSPALRKDAPLRPCLAAASSPAEGSDSAGEAKVAPVGFFDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKVLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQPIPFTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAIIFEGPALMKGGFSDAIAKVGTVKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTCIAIAGVAIYSFIKAKMEEEKRQAKAA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5516g00002 406 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pral5516g00002 406 PANTHER SOLUTE CARRIER FAMILY 35 105 397 - -
Pral5516g00002 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 322 391 - -
Pral5516g00002 406 Pfam Triose-phosphate Transporter family 103 390 IPR004853 -
Pral5516g00002 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5516g00002 Pral-Chr5516 7238 10973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5516g00002 1 404 Antiporters AT5G46110 79.277 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5516g00002 K15283 - gmx:732611 709.523