Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5515g00059 ATGGAGGCCGAGTCTGTGTCTGACGGGGAGAATAATCGGAAAAGGGACGCCGCTGATGAGTACAATGACAACAATAATGGAAGTAACAAAAAAATTGTAAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGAGGCTCTGGAGAAAGCTTATGCTTTGGAGACGTACCCGTCGGAGGCGATGAGGGCAGAACTGTCGCAGAAGTTGGGGCTGTCGGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACGTGCCCAAGTCTTCAAGAAAGGCGCCACCGCCGTTGCCCGCTTCACCGACGGACGAGTTGAGGATGGAGACTGAACTTGCCAATGATTATGGATCCGGGTCGGGTTCGGGCTCAAGCCCGTTTACTCGTTCAGAGTTGCGGAATGTAGTACCTAGGGGTGTTCCTGGGTACTATGAGTCGCAGCAGGCTCTTATGGAGCTCAGAGCAATTGCTTGTGTGGAGGCGCAGTTAGGAGAACCCTTAAGGGAGGATGGACCTATTTTAGGAATTGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCTATCGTTAATGAGCAGCAGAAGCGGCCTAGTCTTGGCTTTGATAGTAAAGTCTATGAAAGACACGATGTTAGAACAAACAAGGCTATGACAAGGGCCTTCCATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGACACAATCTCATTTACTTGATCCGATGGATGGTCCAGCCAGAACTCCGTCTTTTGTAGTAAAAAATGAACAGCTTCCCAGGATTCATGCTGCCCAAGGCCATTCGTCACGTGTTCGTGTTTCATCTCTACAAGATAAGCAAGGGCTTCCCTTTCCGTCGCCCTCTCGTGATGATGATGGCCCTTCTCAAAGGGAATCTTACCCAAACCTAAATATTGGAATGAACTCTCACTTTACTGATCACCCAATTGTTGGACCAGAAAACCCTTATGGGGTAGTTGGTGGACAAATCTTCCCTAGCGATGCAATATTACGGGTTGACAGGAAACGAAAGAGTGATGATTCTAGAACTGCAAGAGAAGCTGAAGCCCATGAGATGAGGATCCAGAAGGAGATAGAGAAACAAGATAACATTAGGCGAAAGAATGAAGAGAGAATGAGGAAAGAGATGGAGAGGCAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGCTGATGCGTGAGAGACAGAGAGAAGAAGAAAGAACAAAGCGTGAGCAAAGACGTGAAATTGAACGAAGGGAAAAGTTTCTGATGAAGGAAAATTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAAGCAGAGAGAAGAAAAGCTGCTCTTGAGAAGGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCCGTAGCAAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGACACCTTGCAAAACCTTGATATGTTTCGGGATTCATTGTGCACTTTTCCACCCAAGAGTGTAAAGCTGAAAAAACCATTTGCCATCCAACCCTGGATCAAATCTGAGGAGCATGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCGGATGTCCTTGAGTTGTGGCCTTTTACTCTTGATGAATTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAGGACATCGAAGATGTTGCAAGGACACCTACAGGATTAGGTACTAACCAGAATGGGGCTGCTAATCCTGGTGGTGGCCATCCAGAGATTGTGGAAGGGGCGTATGCCTGGGGCTTTGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCAGGGTTTGGACCACGGCTGAAAAAAAGAAATATCACATGGTCATATGCAAATGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACATCATCTCCACTCTTCGCAATGGTTCAGCAGCTGAAAATGCTGTGGCAAAAATGCAAGAGAAAGGTCTGTTAGCCCCTCGGAGAAATAGGCACCGGTTGACTCCTGGAACGGTCAAGTTTGCAGCATTTCATGTTTTGTCTCTCGAGGGTGGCAAGGGCTTGACTGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTAGGGACCTGACAACCAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACCAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCCTCAACATATCGAGTTCGAGCTGCATATCGAAAAGATCCTGCTGATGCAGAGGCCATTCTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCTGCTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGTAGATGATTTAGTAAACCCCCTAAGTGATAACAAAACATCTGAACAGTATGATGACCTGAACAATTGCTCTACAAATGGGGGAGAAAACATGAGCCATGACATGGAACTTGTTCAAAATGAGTTTGGCAAGGATCTTCCTTGCGTTCCTGAGAGTTGTTCTAAAGATGCTGATTGCCCAGGTGCTGTTACTGGACAGCAGGTTATTGAAGATTTGAATACTGCAAATCCTGACGATAACATGGAAATTGATGAAAGCAAGTCTGGAGAGTCATGGGTTCAAGGCCTTACAGAAGGAGAATATTCTGACCTTAGCGTAGAAGAACGTCTTAATGCACTAGTAGCATTAGTTGGTGTTGCGAATGAAGGAAATTCAATACGTCTTGTTCTTGAGGACCGTTTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAAAGATGATAATTCTAATAAATCAGATTTTCCATCTCTTGCTGCAAATAAAGTTGAGACACAATATACGGGCCCATCTGCAGAGGGAAACCAGAGCCCATTGCTTGACATCAATATTAATAATAATGAGGCATCACCCAGCACTGCAGAAAATCAAAAGGAAGTTCTGGGTGCACAGAACATGCCTATTGAAAAGCCCTCAGTAGTTCAAGATCTCTTTTTAGGTCCAGACAACCCGCAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCTTATATTGCGCATATAGCGGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATAGGAGACGTAACCGATATTGGCAATTTGTTGCATCCGCTTCCAGCAGTGATCCTGGTGCCGGCAGGGTCTTCATGGAATTGCATGATGGCAGTTGGCGGCTTATTGATTCTGAAGAGGATTTCGATGCGCTCTTGACATCCCTCGATTCACGTGGAATTAGGGAATCTCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAAGAATGCTCAATTTAATAAAAATGCCACCAGATCAATTAAAAATGAAGCTGATGAAGTAGAATTGGTTCCTGAATGCCGTGCTGGATCAGACAGTTCTAGCAGTAGTCTCTGTGGTTTGAGTTCTGACTGTACATTGGAAACAACTTCATCATTTAAAATTGAGCTGGGGAGAAGTGAGAGTGAAAAAAAAGCTGCCTTGACCAAGTATCAAGATGTTCAAAAGTGGATATGGAAAGAATGTTATAATTCATCAACATTATGTTCATTGAAATATGGGCAAAGGAGATGCAAATCACTTCTGGAAATATGTGATATGTGTTTGAATCCATATTTCTTTGAGGATTCCCATTGTAATTTTTGCCACCATACTTTTGCTACTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGAGAAGTTAGATTCCAAAGGTATTTCTACTTGGGATTGTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGCCTTCTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAATCATTGCAATCAATTTGGACAGAAGAGTATAGGAAGCAGTGGGGTGTGAAGCTGAGCAAATCATCTACAACTGATGAACTCTTGCAGTTATTGACCTTGTTGGAGAGAGCAGTACAGCGAGACTTTCTGTCATCAAACTTCTCCACAACAGAAGAAATGTTGGGATCAAGCTGTATGCCAGATGATGCTGTAAATGCTTCTACAGATACTGAATCAGTTCATGTGCTGCCATGGGTGCCACAAACCACTGCAGCTGTGTCGTTGAGAATCTTTGAATTTGATGCATCCATCAGTTACATACCAGTTGAGAAGCCTGAGCTACCTGTTGAGGAGAAAGAAGTGAGAGAATATGTGAAGCTTCCTTCAAGATATGCTCCCTTCAAGTCTGGTAGAGCTATTGAATCAGCAGAATTGGACCATGACGAATTCATCAAGGAAGACAAATCTAATAGAAGTGTTCGAAGGAGCAATAAACGTGGACGGGGGTCTCATGATCAGGGCCGGGGCAAGAAGTTGTCTAGAAGAACACAAGAGCCAAAACAACATGCTGGGCGCCGGAATGTTAAAGGCACTGAGAGTTTGGGTGCGGGATTAAAACAGCAGGGGAGAGGGACACAAGGACAACCTGGTGGACGTGGTCGCCGAACTGTCAGGAAAAGGAGAGTGGAAAAAAGGGCTGTTGAGGACTTATTACTTGGCCACAAGGGTGTCGGTCGTAGTCCCAAAATTGGCAGAGGATCATTGAGAAGCTTGGAAGAGGAATGGGATGGCGAGAAGGAAGCAAGTCCTATCCAAATGGATGGTGTTGATAACAGTAACAGTGCTGAGGAAGTGGAATCTGATGACAATGGACAAGCAGTGGAGTATGAGCAAGGAAACTGGGAGGTAGGTTTCAATGGTGGTAGTTCCAACAGATGGGATGGGGATATGGTTGGAGCGAGCGATGAAGAAGTGGTGGGTGCTTCTGAAGATGACAATGGCATTGAGGAGGGAGAAGAGGAGTTGGAAGAAGATTCAGAGGAGGAAGTTATGAGTGAAGGAGAGGATTCAGATGGTGATGCCAATAGAATGATGGTAAATGAAGAGGGCTCAGACTCAGCTGTCTCTGAGGATTCTTCTGATTAG 5247 0.4395 MEAESVSDGENNRKRDAADEYNDNNNGSNKKIVNSNEGQSKPKRQMKTPFQLEALEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVPKSSRKAPPPLPASPTDELRMETELANDYGSGSGSGSSPFTRSELRNVVPRGVPGYYESQQALMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPIVNEQQKRPSLGFDSKVYERHDVRTNKAMTRAFHEYPFLPNHSSIRSDAYGQLTQSHLLDPMDGPARTPSFVVKNEQLPRIHAAQGHSSRVRVSSLQDKQGLPFPSPSRDDDGPSQRESYPNLNIGMNSHFTDHPIVGPENPYGVVGGQIFPSDAILRVDRKRKSDDSRTAREAEAHEMRIQKEIEKQDNIRRKNEERMRKEMERQDRERRKEEERLMRERQREEERTKREQRREIERREKFLMKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLDTLQNLDMFRDSLCTFPPKSVKLKKPFAIQPWIKSEEHVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNITWSYANDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGGKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFPAVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDLNNCSTNGGENMSHDMELVQNEFGKDLPCVPESCSKDADCPGAVTGQQVIEDLNTANPDDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIDKVRQKDDNSNKSDFPSLAANKVETQYTGPSAEGNQSPLLDININNNEASPSTAENQKEVLGAQNMPIEKPSVVQDLFLGPDNPQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFMELHDGSWRLIDSEEDFDALLTSLDSRGIRESHLRLMLQKIENSFKENVRKNAQFNKNATRSIKNEADEVELVPECRAGSDSSSSSLCGLSSDCTLETTSSFKIELGRSESEKKAALTKYQDVQKWIWKECYNSSTLCSLKYGQRRCKSLLEICDMCLNPYFFEDSHCNFCHHTFATNNGFNFSKHAFQCGEKLDSKGISTWDCSLPLRIRLLKAFLACIEASVPLESLQSIWTEEYRKQWGVKLSKSSTTDELLQLLTLLERAVQRDFLSSNFSTTEEMLGSSCMPDDAVNASTDTESVHVLPWVPQTTAAVSLRIFEFDASISYIPVEKPELPVEEKEVREYVKLPSRYAPFKSGRAIESAELDHDEFIKEDKSNRSVRRSNKRGRGSHDQGRGKKLSRRTQEPKQHAGRRNVKGTESLGAGLKQQGRGTQGQPGGRGRRTVRKRRVEKRAVEDLLLGHKGVGRSPKIGRGSLRSLEEEWDGEKEASPIQMDGVDNSNSAEEVESDDNGQAVEYEQGNWEVGFNGGSSNRWDGDMVGASDEEVVGASEDDNGIEEGEEELEEDSEEEVMSEGEDSDGDANRMMVNEEGSDSAVSEDSSD 1748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 22 46 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 1 49 - -
Pral5515g00059 1748 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 388 434 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 95 117 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 289 303 - -
Pral5515g00059 1748 CDD homeodomain 43 97 IPR001356 GO:0003677
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 1518 1748 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 1518 1561 - -
Pral5515g00059 1748 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Pral5515g00059 1748 SMART HOX_1 40 102 IPR001356 GO:0003677
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 1620 1637 - -
Pral5515g00059 1748 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 980 IPR028942 -
Pral5515g00059 1748 Pfam DDT domain 551 606 IPR018501 -
Pral5515g00059 1748 Gene3D - 25 100 - -
Pral5515g00059 1748 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 1692 1722 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 828 871 - -
Pral5515g00059 1748 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Pral5515g00059 1748 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 20 1748 IPR044977 GO:0006357
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 833 856 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 282 326 - -
Pral5515g00059 1748 Coils Coil 392 477 - -
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 1 21 - -
Pral5515g00059 1748 ProSiteProfiles HARE-type HTH domain profile. 732 801 IPR007759 GO:0006355
Pral5515g00059 1748 Pfam HB1, ASXL, restriction endonuclease HTH domain 732 800 IPR007759 GO:0006355
Pral5515g00059 1748 MobiDBLite consensus disorder prediction 362 381 - -
Pral5515g00059 1748 SUPERFAMILY Homeodomain-like 31 97 IPR009057 -
Pral5515g00059 1748 SMART testlast3 550 609 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5515g00059 Pral-Chr5515 233771 243726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5515g00059 7 1673 Homeobox Transcription Factor Family AT1G28420 50.086 0.0 1370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral5515g00059 WSD 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5515g00059 - - gmx:100777465 2194.85