Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5515g00057 ATGGGTGTGGACTATTATAAGGTTCTGCAGGTTGACAAGAATGCCACCGATGAAGACTTGAAGAAAGCTTACCGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGAGGCCGAGGCCAAATTCAAACAAGTCTCAGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAGCAGTTTATGATCAGTATGGAGAAGAAGGGCTCAAAGGGCAGGTGCCACCTCCAGATGCTGGTGGGGCTTCATTCTTCCATCCTGGAAATGGTCCAACAACTTTTAGGTTTAACCCCAGAAATGCAGACGACATTTTTGCTGAATTTTTCGGGTTTTCAAGTCCATTTGGTGGAATGGGCGGCGGAGGCGGCATGAGAGGCGGCTCAAGGTCCTTTGGTGGAATGTTTGGGGATGATATATTCAGCTCATTTGGAGAAGGCAGGCCTATGAGTCAAGGTCCACGGAAGGCGCCTCCTATTGAAAACACATTGCCTTGCAGCCTTGAGGAGCTCTATAAGGGGACTACCAAGAAGATGAAGATCTCAAGGGAACTTGTAGATGCAAGCGGAAAAACTTTACCAGTGGAGGAAATCTTAACCATTGAAATCAAACCGGGTTGGAAAAAGGGGACGAAGATCACCTTCCCGGAGAAAGGAAACGAGCAGCCAAATGTGACCCCTGCAGATCTGGTATTCATCATCGATGAGAAACCCCACAGTGTGTTTACAAGGGACGGCAATGATCTGATAGTGACACAAAAGATATCACTTGCAGAAGCGCTAACAGGCTACACCGTGCATCTCACTACTCTGGATGGTAGGACTTTGAACATTCCCATTAACAACGTAATACATCCAACCTATGAAGAGGTTGTCCCAAAGGAAGGCATGCCAATTGCTAAAGATCCTTCAAGGAGGGGCAACCTTAGGATTAAGTTCAATATCAAATTCCCAACAAGGTTGACATCGGAGCAGAAAGCTGGAATCAAGAGACTTTTAGGACCATGA 1017 0.4631 MGVDYYKVLQVDKNATDEDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQVSEAYEVLSDPQKRAVYDQYGEEGLKGQVPPPDAGGASFFHPGNGPTTFRFNPRNADDIFAEFFGFSSPFGGMGGGGGMRGGSRSFGGMFGDDIFSSFGEGRPMSQGPRKAPPIENTLPCSLEELYKGTTKKMKISRELVDASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFTRDGNDLIVTQKISLAEALTGYTVHLTTLDGRTLNIPINNVIHPTYEEVVPKEGMPIAKDPSRRGNLRIKFNIKFPTRLTSEQKAGIKRLLGP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5515g00057 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 157 248 IPR008971 GO:0006457|GO:0051082
Pral5515g00057 338 MobiDBLite consensus disorder prediction 146 165 - -
Pral5515g00057 338 SMART dnaj_3 3 62 IPR001623 -
Pral5515g00057 338 CDD DnaJ 4 59 IPR001623 -
Pral5515g00057 338 FunFam DnaJ subfamily B member 13 3 123 - -
Pral5515g00057 338 MobiDBLite consensus disorder prediction 79 101 - -
Pral5515g00057 338 FunFam Dnaj homolog subfamily b member 159 240 - -
Pral5515g00057 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 244 330 IPR008971 GO:0006457|GO:0051082
Pral5515g00057 338 CDD DnaJ_C 161 324 - -
Pral5515g00057 338 Gene3D - 242 322 - -
Pral5515g00057 338 SUPERFAMILY Chaperone J-domain 3 127 IPR036869 -
Pral5515g00057 338 FunFam DnaJ subfamily B member 13 242 322 - -
Pral5515g00057 338 Pfam DnaJ domain 4 67 IPR001623 -
Pral5515g00057 338 Gene3D DnaJ domain 3 126 IPR036869 -
Pral5515g00057 338 Gene3D - 162 240 - -
Pral5515g00057 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pral5515g00057 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pral5515g00057 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pral5515g00057 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pral5515g00057 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pral5515g00057 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pral5515g00057 338 Pfam DnaJ C terminal domain 163 321 IPR002939 -
Pral5515g00057 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5515g00057 Pral-Chr5515 229248 231703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5515g00057 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 6.32e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5515g00057 K09510 - qsa:O6P43_031876 573.933