Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5515g00023 ATGGGGGAGAGTTCAGGCTCGGGATTCAAGGAATATGTGGCCGGTTTGCTCGCTGGGGTTGCGACGGTGGCTACGGGCCATCCCTTTGACACAGTGAAGGTGAAGCTGCAAAAACACAATACTGAAGCACATGGGATTCAATATAGGAGTGGTTTGCATTGCACTGCTAGGATACTGAAGACTGAGGGAATTAGAGGTCTTTATAGTGGAGCAACATCATCTTTTATTGGGATGGCTTTTGAAAGTTCACTGCTTTTTGGCATTTATTCCCAGACAAAACTAGCCCTACAGGGTGGTCTGCCAAGCAGTGTACCACAGCCTCATGTAATAATACCATCTGCAGCTTATGGCGGTGCCATAATCAGCTTCGTGTTGTGTCCATCAGAGCTGGTGAAGTGCAGGATGCAAATCCAAGGCACTGACTCTTTGGTTCCTACGTCCAGCAGATACAAGAGTCCTCTTGATTGTGCCCTAAGAACTGTAAAAACTGAAGGGGTGGCTGGAATCTTTCGCGGTGGTTATACAACATTGCTTAGAGAATCTATCGGAAATTCTGTGTTTTTCAGTGTTTATGAATATGTGCGTTATCACATGCATTCACACGTCAAAGTTGCCTTGTCCAATTACAGTAACTTGATTGACATGGGAATTGGGATCGTTTCTGGTGGCCTCAGTGGTGTAGCTTTTTGGTTGGCTGTTTTGCCCCTGGACGTGGCAAAAACCATTATTCAGACTAATCCCGACAGAAACTGTCCAAGGAATCCTTTTCCAGTCTTGAGTAATATTTACAGGAGGGCTGGATTAAAGGGGCTTTACACGGGCTTGGGTCCCACGGTTGCTCGAGCATTTCCTGCTAATGCAGCGGCAATTGTCACCTGGGAGCTAGCAATGAAAATGTTAGGTATTAAGCATGACTAA 918 0.4597 MGESSGSGFKEYVAGLLAGVATVATGHPFDTVKVKLQKHNTEAHGIQYRSGLHCTARILKTEGIRGLYSGATSSFIGMAFESSLLFGIYSQTKLALQGGLPSSVPQPHVIIPSAAYGGAIISFVLCPSELVKCRMQIQGTDSLVPTSSRYKSPLDCALRTVKTEGVAGIFRGGYTTLLRESIGNSVFFSVYEYVRYHMHSHVKVALSNYSNLIDMGIGIVSGGLSGVAFWLAVLPLDVAKTIIQTNPDRNCPRNPFPVLSNIYRRAGLKGLYTGLGPTVARAFPANAAAIVTWELAMKMLGIKHD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5515g00023 305 Pfam Mitochondrial carrier protein 219 301 IPR018108 -
Pral5515g00023 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Pral5515g00023 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Pral5515g00023 305 SUPERFAMILY Mitochondrial carrier 9 294 IPR023395 -
Pral5515g00023 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Pral5515g00023 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Pral5515g00023 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Pral5515g00023 305 Gene3D Mitochondrial carrier domain 12 304 IPR023395 -
Pral5515g00023 305 FunFam Mitochondrial carrier protein 1 109 - -
Pral5515g00023 305 FunFam Mitochondrial amino acid carrier 180 304 - -
Pral5515g00023 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5515g00023 Pral-Chr5515 69999 75927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5515g00023 25 300 Antiporters AT1G79900 29.537 4.85e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5515g00023 K15109 - gmx:100815087 489.574