Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5515g00022 ATGGAAAGAAGCGGAGAGGGAAAGAGGAGCTCCAAGTACAAGGTGGAGGAGGAAGAGGAGGTTGAAGATGAAGAAGAAGATGAAGAGCTTGATGAGTTCAATTTAGGAGACGATGGGAGGAAGAAGATGAGAGATCTGTACAGCAAGGGAGGGTCGTCCTCATCAATGGCGCCTTCATGTCAGGTGGAAGGCTGTGACAGTGATCTGAGTGAGGCTAAGCACTACCATCGCCGCCATAAGGTCTGTGAGTTCCATGCCAAGGCTGCTTCTGTGCTCATTGCCGGCTTGCACCAAAGGTTTTGCCAACAATGCAGCAGGTTTCATGAGCTGGAAGAATTTGATGACACGAAAAGGAGCTGTAGAAAGCGTTTGGCTGGACACAATGAAAGGCGTCGAAAGAATGCATCTTAA 411 0.4891 MERSGEGKRSSKYKVEEEEEVEDEEEDEELDEFNLGDDGRKKMRDLYSKGGSSSSMAPSCQVEGCDSDLSEAKHYHRRHKVCEFHAKAASVLIAGLHQRFCQQCSRFHELEEFDDTKRSCRKRLAGHNERRRKNAS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5515g00022 136 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 135 IPR044817 GO:0003677
Pral5515g00022 136 FunFam Squamosa promoter-binding-like protein 14 51 121 - -
Pral5515g00022 136 Gene3D - 50 121 IPR036893 GO:0003677|GO:0005634
Pral5515g00022 136 ProSiteProfiles Zinc finger SBP-type profile. 57 134 IPR004333 GO:0003677
Pral5515g00022 136 MobiDBLite consensus disorder prediction 1 63 - -
Pral5515g00022 136 MobiDBLite consensus disorder prediction 17 33 - -
Pral5515g00022 136 MobiDBLite consensus disorder prediction 1 16 - -
Pral5515g00022 136 SUPERFAMILY SBT domain 58 134 IPR036893 GO:0003677|GO:0005634
Pral5515g00022 136 Pfam SBP domain 60 133 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5515g00022 Pral-Chr5515 67754 69198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5515g00022 51 136 SBP-box Gene Family AT2G33810 68.605 2.41e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral5515g00022 SBP 9.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5515g00022 - - gmx:100817597 160.999