Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5515g00009 ATGGCTGCATCTTCTGCAGCTCTCAATTCCCTTTCGTCTCTCTCCCTTCCCTCTTCTTCCCGCTTCTCTCTCCTCCCCACCACCAAATTCACCTTTTATATCCTTCCCAAAACCTCACAACCATTTCTCTCTACCTCCTCATCCCCCATTATCCCCAAACCCAAATCCAAGTCCTCCGACGACATCGACACCTCCTTCTTCGACAATGTAAGGCCAGAAGAAGACGTCGCCTTCAACCCTCCTGAACCTCCCGAAGGCTTCATTCCCCCTTCTCCCGTCGATGACGGTCCGATGGAGACCGAAGAGGAAATCGCCGCTGCTTATGAGGAGCTTTATGGACCTGCATACAGTGGTGTCTCTGTTCTGGGCAACGATGTGCATGTAATGGACTCTAAGATAAAAAAAGACACTGGGTTCGGCTCCAAGGGGAAGAAAGAGAAGGTTAAGGATGGTTTTGAAGAAAGGGTAGTACAGGTCAGAAGGGTGACCAAGGTTGTAAAAGGAGGAAAGCAGTTGCACTTCAGGGCAATTGTTGTTGTGGGTGACAAGAAAGGCCAAGTGGGCGTAGGAGTTGGGAAAGCAAAGGAGGTTATAGGAGCAGTTCAGAAATCTGCTGTAAATGCAAGGCGGAATATCATCACAGTGCCTATGACTAAGTACCTGACTTTCCCACATAGATCTGAGGGAGATTATGGAGCAGCAAAGGTGATGCTTAGACCTGCTTCACCTGGTACTGGAGTTATTGCTGGTGGATCTGTGAGAATTGTTCTAGAAATGGCAGGCGTTGAGAATGCTTTGGGAAAGCAACTAGGAAGCAATAACGCCCTCAACAATGCCAGAGCAACAGTTGTTGCTGTGCAGAAAATGAGGCAGTTCCGCGAAGTTGCTGAGGAGCGAGGTATCCCAATGGAAGAACTATGGAAATAA 927 0.4854 MAASSAALNSLSSLSLPSSSRFSLLPTTKFTFYILPKTSQPFLSTSSSPIIPKPKSKSSDDIDTSFFDNVRPEEDVAFNPPEPPEGFIPPSPVDDGPMETEEEIAAAYEELYGPAYSGVSVLGNDVHVMDSKIKKDTGFGSKGKKEKVKDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVIGAVQKSAVNARRNIITVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMRQFREVAEERGIPMEELWK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5515g00009 308 ProSiteProfiles S5 double stranded RNA-binding domain profile. 152 215 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral5515g00009 308 MobiDBLite consensus disorder prediction 41 62 - -
Pral5515g00009 308 SUPERFAMILY dsRNA-binding domain-like 149 217 - -
Pral5515g00009 308 Pfam Ribosomal protein S5, C-terminal domain 229 299 IPR005324 GO:0003735|GO:0005840|GO:0006412
Pral5515g00009 308 ProSitePatterns Ribosomal protein S5 signature. 169 201 IPR018192 -
Pral5515g00009 308 FunFam 30S ribosomal protein S5 141 213 - -
Pral5515g00009 308 FunFam 30S ribosomal protein S5 217 308 - -
Pral5515g00009 308 SUPERFAMILY Ribosomal protein S5 domain 2-like 222 300 IPR020568 -
Pral5515g00009 308 NCBIfam 30S ribosomal protein S5 150 305 IPR005712 GO:0003735|GO:0006412|GO:0015935
Pral5515g00009 308 MobiDBLite consensus disorder prediction 1 21 - -
Pral5515g00009 308 Gene3D - 219 307 IPR014721 -
Pral5515g00009 308 Pfam Ribosomal protein S5, N-terminal domain 152 216 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral5515g00009 308 PANTHER RIBOSOMAL S SUBUNIT 137 307 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral5515g00009 308 Hamap 30S ribosomal protein S5 [rpsE]. 129 305 IPR005712 GO:0003735|GO:0006412|GO:0015935
Pral5515g00009 308 Gene3D - 143 213 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5515g00009 152 292 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 30.872 6.60e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5515g00009 K02988 - qsa:O6P43_012664 414.075