Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5514g00004 ATGACAGAGAACGTCCCAGTTGTTTCGTCCAGAGGCGATAGGAAGGTCACAGAGAGGAACCGAAGAAGCCATATGAGGGCTCTTTACTCCAAGCTCAGCTCACTCGTCCCTCGTCAAACCTCAAGGGAAGTGGTTTCTGTGCCGGATCAGCTGGGTGAAGCCACGAACTACATAAAGAAACTTCAGATAAGGTTGGAGAAGATGAAGGAGAAGAAGCTCAACCTTATGGGGACCGGCAAGAAGAGAAATGCTAATGAGAGCCTAACTAACAATAGTAGAGGAATCATTAGGGGGTCAAAATCGCCCAAAGTTGAGATTCACCAAATGGGTTCAGCATTAGACGTTTCTGCGATCACTGGGTTGGATTGCCAGTTCATTTTCAACGAGTTCATTCGCATTCTTCACGAAGAACAAGCCGATATTGTTAACGCCAGTTATTCAGTCGTTCAAGACGCTGTTTTTCACACCATACACTGTCAGATAAGTGAATTTGGAAACAGATCTGAGAGGATATCGGAGAGATTAAAGCGGTTTGTGTACGGTTCTGGTGCTTTTTGA 558 0.4534 MTENVPVVSSRGDRKVTERNRRSHMRALYSKLSSLVPRQTSREVVSVPDQLGEATNYIKKLQIRLEKMKEKKLNLMGTGKKRNANESLTNNSRGIIRGSKSPKVEIHQMGSALDVSAITGLDCQFIFNEFIRILHEEQADIVNASYSVVQDAVFHTIHCQISEFGNRSERISERLKRFVYGSGAF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5514g00004 185 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Pral5514g00004 185 MobiDBLite consensus disorder prediction 1 21 - -
Pral5514g00004 185 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
Pral5514g00004 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 74 IPR036638 GO:0046983
Pral5514g00004 185 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 180 - -
Pral5514g00004 185 Coils Coil 51 78 - -
Pral5514g00004 185 SMART finulus 15 67 IPR011598 GO:0046983
Pral5514g00004 185 Gene3D - 7 92 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5514g00004 Pral-Chr5514 28374 29391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5514g00004 13 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 45.665 6.71e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral5514g00004 HLH 2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5514g00004 - - pcin:129305410 204.912