Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5514g00001 ATGGAAGAAGATACCTCTTCATGGATAAGAAGGACGAAATTCTCTCACACTGTGTGCCACCGATTGGACTCTTCAAGATTGGCCACGATTCCTCTCTGCATTGAGTCTGAAGCCGCCTCTGGTCTTAAATCGAGGCCTACAGTTTCTTTCAATCTGAACCATGGCGCTGATGGACCAAAGATGCATCAAAATCCTAATGTGAAAAAGCCGAGATCTGTGTCTCCTTTACCAGAAACATTCCTCTCTGACACCTTCCGCGAAGCCAAGCATGAACGAAAGAGGTTCTCAACTCCTGGTCCTCGGAGGAAAGAACATCATGATAAGAATCATGACAAGAGGATCATGGGGAAGGTGTCGAATAAGGACTCTCGAGAGGTCAAAACATTCAATTTGAAATCGCCATCGCGAAGTCCGATCTTGTCAAGTTCGAAATCGAGCGATAACCTGAGGGGTCGGAAGGAATCTGCGTGGACCAAGTATTTTGACCATGGCGGAGGAAGAGTTACTGCTCTTGAAACTGCAGAAGAATGGACGGTTGATCTTTCTAAGCTCTTTCTTGGGCTTAGGTTTGCTCATGGAGCTCATAGCCGACTCTATCGCGGTAATTATAAGGATGAACCTGTTGCAGTGAAACTTATTAGGGTACCAGATGATGACGATAGTGGAACCATGGCTGGTCGATTAGAGAAACAGTTCATTAGAGAAGTCACTCTTTTATCTCGTCTCCACCATGAAAATGTTATAAAGTTTGTAGCAGCTTGCAGAAAACCACCCGTCTATTGTGTCATCACAGAATTTCTGTCAGAAGGTTCCTTAAGGGCATACTTGCATAAGTTAGAGCACAAAACTGTTCCTCTTGAAAAACTAATAGCTTTTGCTCTGGAAATTGCCCGTGGAATGGAATATATACACTCTCGAGGTATCATACATCGGGACCTTAAGCCAGAGAATGTCCTTATCAGTGAAGATTCTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAGGCATACCGTGATGTATTTACTGATGACCCTGGCACATATCGTTGGATGGCCCCTGAGATGATCAAACGTAAATCCTATGGGAGAAAGGTTGATGTGTACAGTTTCGGGCTGATCCTATGGGAAATGGTGACTGGGACAATACCGTACGAGGATATGACTCCCATCCAGGCTGCTTATGCTGTGGTAAATAAGAATTCAAGACCTGTTATTCCTTCAAGTTGCCCATCTGCTATGCGAGCTTTAATTGAGCAATGTTGGTCCTCACATCCAGATAAGAGGCCCGAGTTCTGGCAGATTGTCAAGATATTAGAGCAATTTGAATCTTCACTTTCCCTTAATGGAACTATGAAGCTACCGCAAAACTTTTGTTGCCAAGACCATAAGAAAGGACTGCTTCATTGGATTCAAAAGCTTGGTCCTGTGCATCAAAATAACGGCCCTGTGCCTAAGCCGAAGTTCACTTAA 1476 0.4411 MEEDTSSWIRRTKFSHTVCHRLDSSRLATIPLCIESEAASGLKSRPTVSFNLNHGADGPKMHQNPNVKKPRSVSPLPETFLSDTFREAKHERKRFSTPGPRRKEHHDKNHDKRIMGKVSNKDSREVKTFNLKSPSRSPILSSSKSSDNLRGRKESAWTKYFDHGGGRVTALETAEEWTVDLSKLFLGLRFAHGAHSRLYRGNYKDEPVAVKLIRVPDDDDSGTMAGRLEKQFIREVTLLSRLHHENVIKFVAACRKPPVYCVITEFLSEGSLRAYLHKLEHKTVPLEKLIAFALEIARGMEYIHSRGIIHRDLKPENVLISEDSHLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAYAVVNKNSRPVIPSSCPSAMRALIEQCWSSHPDKRPEFWQIVKILEQFESSLSLNGTMKLPQNFCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5514g00001 491 CDD STKc_MAP3K-like 191 440 - -
Pral5514g00001 491 MobiDBLite consensus disorder prediction 130 146 - -
Pral5514g00001 491 Pfam Protein tyrosine and serine/threonine kinase 190 440 IPR001245 GO:0004672|GO:0006468
Pral5514g00001 491 ProSiteProfiles Protein kinase domain profile. 184 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5514g00001 491 MobiDBLite consensus disorder prediction 83 129 - -
Pral5514g00001 491 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 447 - -
Pral5514g00001 491 FunFam serine/threonine-protein kinase HT1 269 462 - -
Pral5514g00001 491 Gene3D Phosphorylase Kinase; domain 1 172 267 - -
Pral5514g00001 491 Gene3D Transferase(Phosphotransferase) domain 1 268 468 - -
Pral5514g00001 491 PRINTS Tyrosine kinase catalytic domain signature 411 433 IPR001245 GO:0004672|GO:0006468
Pral5514g00001 491 PRINTS Tyrosine kinase catalytic domain signature 302 320 IPR001245 GO:0004672|GO:0006468
Pral5514g00001 491 PRINTS Tyrosine kinase catalytic domain signature 264 277 IPR001245 GO:0004672|GO:0006468
Pral5514g00001 491 PRINTS Tyrosine kinase catalytic domain signature 367 389 IPR001245 GO:0004672|GO:0006468
Pral5514g00001 491 PRINTS Tyrosine kinase catalytic domain signature 348 358 IPR001245 GO:0004672|GO:0006468
Pral5514g00001 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Pral5514g00001 491 MobiDBLite consensus disorder prediction 53 149 - -
Pral5514g00001 491 SUPERFAMILY Protein kinase-like (PK-like) 168 440 IPR011009 -
Pral5514g00001 491 SMART serkin_6 184 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5514g00001 491 FunFam Serine/threonine-protein kinase isoform 1 174 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5514g00001 Pral-Chr5514 1681 4952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5514g00001 1 491 MAP Kinase Kinase Kinase AT5G58950 57.062 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5514g00001 PK_Tyr_Ser-Thr 7.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5514g00001 - - gmx:100784454 734.176