Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5507g00009 ATGATTCATAAGAAGATTACATGGAGGTCTATCATCTTGACGTTCAGTTGTTACAGGACTAAATGCCCAATAAAGGAATCCAAAAAGAAGATGTCCAAGCAAGGTTCTTTTCAGAGACTAAGCCTCTCTGACATCAGCATTTCGAGCTCTGGTCAGGCCATTGACGATCTTTCCATCTCCCTTGCTGGCCAAAAGCTGTATCCATTTACTCTTGAAGAGCTAAGAGAAGCAACACATAATTTCTCCTGGAGTAATGTGATAGGTGAAGGTGGTTTTGGACCCGTGTACAAGGGATTTATTGATGACAAGCTTAGACCAGGTTTGAAAGCTCAACCTGTGGCTGTGAAACGACTAAACTTGGACGGCATGCAAGGGCACAGGGAATGGCTGGCAGAGATAATCTTTCTCGGACAGCTAAAGCATCCAAATCTTGTTGACTTACTTGGGTACTGCCACGAGGAGGAACACAGGCTTTTAGTGTATGAATACATCCCAAGAGGCAGCTTGGAGAGCCAACTTTTTAGAAGATACACTGCAGCCTTGCCATGGTCAACCAGGTTACAAATTGCACTGGGAGCAGCCAAGGGCCTAGCCTTCCTTCATGAAGCAGACAAACCTGTAATATATAGAGATTTCAAAACTTCAAATATCTTATTAGACTCGGATTATACCGCTAAACTTTCAGACTTTGGGTTTGCAAAAGATGGACCTGAAGGGGAAGACACACATGTAACAACACGAATAATAGGAACACAAGGCTATGCAGCACCAGAGTACATCATGACAGGCCACCTTACAACCAAGAGCGACGTGTATAGCTATGGGGTGGTACTATTAGAACTTATAACAGGAAGAAGGATAATGGATAAGAGCAGGCCAAATAGAGAGCAGAGCCTGGTGGAATGGGCGAGGCCTTTATTGAGAGATCAAAGAAAGCTCCACCAGTTCATAGACCCTCGACTTGAAGGACGATTTCCTATCAAAGGAGCTCGTAAAGTCGCAGCATTGGCTTACAAGTGCTTGAGCCACCACCCACGTCCTAGACCCACAATGAGCGATGTGGTCAACACATTGGAGACCCTTCAGAACTTTGATGATACATTCATAGAACCCTTTGTGTATGTAGCCATGAATCAAGATGGCAACATCAACTAA 1155 0.4433 MIHKKITWRSIILTFSCYRTKCPIKESKKKMSKQGSFQRLSLSDISISSSGQAIDDLSISLAGQKLYPFTLEELREATHNFSWSNVIGEGGFGPVYKGFIDDKLRPGLKAQPVAVKRLNLDGMQGHREWLAEIIFLGQLKHPNLVDLLGYCHEEEHRLLVYEYIPRGSLESQLFRRYTAALPWSTRLQIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDFGFAKDGPEGEDTHVTTRIIGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGRRIMDKSRPNREQSLVEWARPLLRDQRKLHQFIDPRLEGRFPIKGARKVAALAYKCLSHHPRPRPTMSDVVNTLETLQNFDDTFIEPFVYVAMNQDGNIN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5507g00009 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pral5507g00009 384 Gene3D Phosphorylase Kinase; domain 1 41 163 - -
Pral5507g00009 384 FunFam Serine/threonine-protein kinase BIK1 48 163 - -
Pral5507g00009 384 FunFam Probable serine/threonine-protein kinase PBL8 164 376 - -
Pral5507g00009 384 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Pral5507g00009 384 CDD STKc_IRAK 87 361 - -
Pral5507g00009 384 SUPERFAMILY Protein kinase-like (PK-like) 59 361 IPR011009 -
Pral5507g00009 384 PANTHER OS01G0588500 PROTEIN-RELATED 39 362 - -
Pral5507g00009 384 ProSiteProfiles Protein kinase domain profile. 81 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5507g00009 384 Gene3D Transferase(Phosphotransferase) domain 1 164 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5507g00009 Pral-Chr5507 65026 66760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5507g00009 69 369 Glycoside Hydrolase AT3G07070 51.645 6.35e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5507g00009 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5507g00009 - - gmx:100802636 612.838