Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5507g00005 ATGATGGATGAAGGTCAAAGCCAGTCTATTTTGGTCAGTGGTGAAAGTGGTGCGGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGGACAGTTGAACAACAAGTACTTGAATCCAATCCCCTCTTGGAGGCTTTTGGTAATGCCAGGACTGTCAGGAATGACAATTCTAGTCGCTTTGGGAAGTTTGTTGAAATTCAGTTCGATTCAAACGGTAGAATATCTGGAGCTGCTATTCGAACTTACTTACTGGAAAGGTCACGAGTAGTGCAGATAACAGATCCTGAAAGAAACTATCATTGCTTTTATCAGTTGTGTTCATCTGAAAGGGATGCTGAGAAGTATAAGTTAAGACATCCGAGCCACTTTCACTATCTAAATCAAAGTAAAACGTATGAACTAGAAGGTGTAAGCAGTGCTGAAGAATACATGAAGACAAGGAGGGCAATGGATATAGTTGGTATAAGCCATGAGGATCAGGAAGCCATATTTCGCACATTAGCTGGAATCTTACATTTGGGGAACATTGAATTTTCTCCTGGAAAAGAACATGACTCATCAGCAATAAAGGATGAGAAGTCAAGGTTTCATTTGCAGATGGCAGCAGATCTCTTCATGTGTGAAGTGAATCTACTGTTGGCAACATTGTGTACTCGCTCAATACAAACCCGTGAAGGAAATATCGTGAAAGCTCTTGATTGCAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCTAAAACTGTTTATGCTCGCCTATTTGACTGGCTAGTTGAAAAAATCAACAAGTCTGTTGGACAAGATAACAATTCCCGGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGCATTAACTTTGCAAATGAAAAGCTCCAGCAACATTTTAACGAGCATGTATTCAAGATGGAGCAGGAGGAGTACAGCAAGGAAGAAATTAACTGGAGTTACATTGAGTTTATTGACAACCAAGACGTTTTAGACTTGATTGAAAAGAAGCCTATTGGCATCATTGCACTCTTGGATGAAGCTTGCATGTTTCCAAAATCAAATCATCAAACATTCTCAACCAAGTTGTTCCAGCATTTCCGGTCCCACCCAAGGTTGGCAAAAGAAAAGTTCTCGGAAACTGATTTTACCATCTCTCATTATGCTGGAAAGGTCACTTACCATACAGATAGCTTCTTGGACAAAAATCGTGATTATGTTGTTGTTGAACATTGCAATCTATTGTCTTCTTCCAAATGCCCCTTCGTGTGTGATCTTTTCCCTCTGCTTCCAGAGGAATCTTCTTCTAGATCATCATACAAATTTTCTTCGGTAGCCTCCAGATTTAAGCAACAACTTCAAGCATTGATGGAGACTCTTAATACAACAGAGCCCCATTACATACGATGTGTGAAGCCAAATTCTTTGAATCGGCCACAAAGGTTTGAGAATTCAAGTGTGATACATCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGAATTAGTCTTGCGGGTTACCCCACTCGTAGGACTTACTCAGAGTTCATTGATCGCTTTGGGCTGATAGCTCCTGAATTTATGGATGGCAGTTATGATGAAAAAACTACCACCGCAAAAATTTTACGGAAGCTAAACCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATCGGCATTTTAGATTCCCGCCGTGCTGAAGTGTTGGACTACGCTGCAAAGTGTATTCAGCGTCGACTAAGAACATTTATTACTCACAGGGAATTTATCTCCATCCGTGCTGCTGCATTTTCTATTCAAGCATACTGCCGGGGATGTCTTGCTCGAAAGATGTATGCTGCTAAACGGGAGACATCTGCTGCTATTTTCATTCAGAAATATATTCGTATGTGGATAATGAAACAATCATACTTGAAACTATATTCTTCTTCTATAACCATACAATCCTTTATTCGTGGTTTCACAACTCGCCAAAGATTTGTTCATGGAAAAGAACACAGAGCTGCTACTGTTATTCAGGCTTGTTGGAAGATGTACAAAATTCGGTCAGTTTTCCAACATCGTCACACTTCAATTGTGGCAATACAATGTCTTTGGCGGTGTAAGCAAGCGAAAAGAGAGCTTCGCAGATTGAAAAAAGAGGCTAGTGAAGCTGGTGCCTTGCGTCTGGCCAAGAATAAACTTGAAAAGCAATTGGAAGATCTCACATGGCGATTGCATCTTGAAAAAAGATTAAGGGTTTCTAATGAAGAGGCTAAGCAAGTGGAGATGTCAAAACTTCAAAAGACACTAGAAGCTCTAAATCTTGAATTGGATGCAGCCAAATTAGCAACGATTAATGAGTGTAACAAGAATGCTATGCTTCAAAATCAATTGGAATTGTCAGTAAAGGAGAAATCGGCTTTGGAAAGGGAGCTAGTTGCAATGGATGAACTACGGAAAGAAAATGCTGCGCTAAAGAGTTCTTTGGATGCCTTCGAAAGGAAGAATGCAGCTTTAGAGCTTGAGCTTATGAAGGCGCAAAAAGTTAGTGATGAAACCATTGAGAAACTGGGGGAGGTTGAACGAAAATGTTCTCAATTCCAGCAAAATTTGAAAAGTCTTGAGGAGAAGTTGTCAACTTTGGAGGATGAAAATCATGTCCTCCGTCAGAAAGCTTTGAATCCATCTCCTAAGAGCAGCCGACCAGCTATCGCAAAGTCTTTTTCAGAAAAATACTCAAATTCAATAGCTCCCCGTACGGAAAGAAAACCTATATTTGAGTCACCCACTCCCACAAAACTTATTGCCCCATTTCCACTTGGCTTGTCAGACTCTCGTAGATCTAAGTTAACTGCAGAGAGACACCAGGATAACTATGAATTCCTCTCTAGATGTATCAAGGAAGAGTTGGGGTTCAAAAATGGTAAACCGTTGGCAGCATGCATCATTTACAGGTGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGAACAGCCATTTTTGATTACATAATTGAGGGAATTAATGAAGCCTTAAAGGCTAGAGATGATGACTCTCTCTTACCATATTGGCTGTCCAATACTTCCGCGCTTTTGTGCCTCCTACAAAGGAACCTACGTTCAAATGGCTTTCTAGCTACTACTGCCCAGCGTTATACGGGATCTTCTGGCTTGACCAGCCGAATTGGACATGGACTGAAATCTCCAATAAAATTCCTTGGATATGATGATGGTGTGTCACATGTAGAGGCAAGATATCCTGCTATACTTTTCAAACAACAGTTAACTGCTTGTGTAGAGAAGATTTTTGGCCTGATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTTTGAGCTCGTGCATTCAGGCACCAAAAACTGCACGGGTGCATGGGGGAAAATCATCCCGGTCTCCTAGTGGACTTCCTCAGCAATCTCCTGGTGGTCAGTGGGACAACATCATTAAATTTTTGGATTCACTTATGAGCCGACTACGTGGAAATCATGTACCATCATTCTTCATACGTAAACTAGTTACTCAAGTCTTCTCTTTCATCAATATTACACTCTTCAACAGCCTTCTGTTGCGGCGTGAATGTTGTACGTTCTCAAATGGGGAATACGTGAAATCCGGTCTAGCTGAACTGGAAAAGTGGATAGCTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCATGAGCTAAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATTCATCAAAAGAGGAAGAAATCCTTGGAAGAGATTCGACAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATCTATCGCATCAGTACTATGTACTGGGATGACAAGTACGGAACGCAGAGTGTATCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAAAATCTGACTTCAAATTCATTTTTGTTGGATGATGATCTGAGCATTCCATTTTCTGCTGAAGACATAGATATGGCGATATCTGCAATAGATCCCGATGACATTGATCACCCGCCATTTCTGCCGGAATATCCTTGCGCCCAGTTTCTTGTTGCACATTAG 4131 0.4106 MMDEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSSERDAEKYKLRHPSHFHYLNQSKTYELEGVSSAEEYMKTRRAMDIVGISHEDQEAIFRTLAGILHLGNIEFSPGKEHDSSAIKDEKSRFHLQMAADLFMCEVNLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVEKINKSVGQDNNSRMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSNHQTFSTKLFQHFRSHPRLAKEKFSETDFTISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKCPFVCDLFPLLPEESSSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQRFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFIDRFGLIAPEFMDGSYDEKTTTAKILRKLNLENFQLGRTKVFLRAGQIGILDSRRAEVLDYAAKCIQRRLRTFITHREFISIRAAAFSIQAYCRGCLARKMYAAKRETSAAIFIQKYIRMWIMKQSYLKLYSSSITIQSFIRGFTTRQRFVHGKEHRAATVIQACWKMYKIRSVFQHRHTSIVAIQCLWRCKQAKRELRRLKKEASEAGALRLAKNKLEKQLEDLTWRLHLEKRLRVSNEEAKQVEMSKLQKTLEALNLELDAAKLATINECNKNAMLQNQLELSVKEKSALERELVAMDELRKENAALKSSLDAFERKNAALELELMKAQKVSDETIEKLGEVERKCSQFQQNLKSLEEKLSTLEDENHVLRQKALNPSPKSSRPAIAKSFSEKYSNSIAPRTERKPIFESPTPTKLIAPFPLGLSDSRRSKLTAERHQDNYEFLSRCIKEELGFKNGKPLAACIIYRCLLHWHAFESERTAIFDYIIEGINEALKARDDDSLLPYWLSNTSALLCLLQRNLRSNGFLATTAQRYTGSSGLTSRIGHGLKSPIKFLGYDDGVSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKTARVHGGKSSRSPSGLPQQSPGGQWDNIIKFLDSLMSRLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAISAIDPDDIDHPPFLPEYPCAQFLVAH 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5507g00005 1376 Gene3D - 644 691 - -
Pral5507g00005 1376 Gene3D - 594 643 - -
Pral5507g00005 1376 Gene3D - 692 741 - -
Pral5507g00005 1376 Coils Coil 876 910 - -
Pral5507g00005 1376 ProSiteProfiles IQ motif profile. 713 742 IPR000048 GO:0005515
Pral5507g00005 1376 FunFam Myosin heavy chain 110 164 - -
Pral5507g00005 1376 Coils Coil 810 868 - -
Pral5507g00005 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 740 IPR027417 -
Pral5507g00005 1376 MobiDBLite consensus disorder prediction 1148 1167 - -
Pral5507g00005 1376 Pfam DIL domain 1197 1300 IPR002710 -
Pral5507g00005 1376 Coils Coil 726 770 - -
Pral5507g00005 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 639 IPR027417 -
Pral5507g00005 1376 ProSiteProfiles IQ motif profile. 690 719 IPR000048 GO:0005515
Pral5507g00005 1376 SMART DIL_2 1196 1303 IPR002710 -
Pral5507g00005 1376 CDD MyosinXI_CBD 972 1344 IPR037975 GO:0007015
Pral5507g00005 1376 Gene3D - 526 592 - -
Pral5507g00005 1376 CDD MYSc_Myo11 1 579 IPR036018 -
Pral5507g00005 1376 ProSiteProfiles Myosin motor domain profile. 1 591 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00005 1376 PANTHER MYOSIN 691 1310 - -
Pral5507g00005 1376 Gene3D Myosin VI head, motor domain, U50 subdomain 169 460 - -
Pral5507g00005 1376 Pfam IQ calmodulin-binding motif 618 635 IPR000048 GO:0005515
Pral5507g00005 1376 Pfam IQ calmodulin-binding motif 691 710 IPR000048 GO:0005515
Pral5507g00005 1376 Pfam IQ calmodulin-binding motif 668 685 IPR000048 GO:0005515
Pral5507g00005 1376 Pfam IQ calmodulin-binding motif 643 662 IPR000048 GO:0005515
Pral5507g00005 1376 Coils Coil 775 802 - -
Pral5507g00005 1376 ProSiteProfiles Dilute domain profile. 1021 1321 IPR002710 -
Pral5507g00005 1376 ProSiteProfiles IQ motif profile. 617 646 IPR000048 GO:0005515
Pral5507g00005 1376 SMART iq_5 616 638 IPR000048 GO:0005515
Pral5507g00005 1376 SMART iq_5 664 686 IPR000048 GO:0005515
Pral5507g00005 1376 SMART iq_5 641 663 IPR000048 GO:0005515
Pral5507g00005 1376 SMART iq_5 689 711 IPR000048 GO:0005515
Pral5507g00005 1376 SMART iq_5 712 734 IPR000048 GO:0005515
Pral5507g00005 1376 ProSiteProfiles IQ motif profile. 665 694 IPR000048 GO:0005515
Pral5507g00005 1376 Gene3D - 296 482 - -
Pral5507g00005 1376 Gene3D - 110 167 - -
Pral5507g00005 1376 Gene3D Kinesin motor domain 1 521 IPR036961 -
Pral5507g00005 1376 MobiDBLite consensus disorder prediction 1152 1167 - -
Pral5507g00005 1376 Pfam Myosin head (motor domain) 1 579 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00005 1376 PRINTS Myosin heavy chain signature 286 314 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00005 1376 PRINTS Myosin heavy chain signature 7 32 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00005 1376 PRINTS Myosin heavy chain signature 339 367 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00005 1376 PRINTS Myosin heavy chain signature 54 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00005 1376 SMART MYSc_2a 1 592 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5507g00005 Pral-Chr5507 22007 46293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5507g00005 1 1374 Myosins gene family AT4G33200 74.764 0.0 2111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5507g00005 K10357 - gmx:100790815 2358.56