Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5507g00004 ATGAATTTCCGTCATGGCTCCAAAGTTTGGGTTGAAGACAGGAATTTGGCATGGGTGGCCGCTGAGGTTACCGGCTTTGCTGGAAAGCAAGTCCAACTTGTCACTGCTTCTGGGAAGAAGGTTTCTGCACTGCCAGAGAAACTCTTCCCCAGGGATGCAGATGAAGAGGAGCATGGTGGAGTGGAAGATATGACGAGGCTGGCTTACTTGAATGAGCCGGGAGTTCTGTATAATCTTCAAAGAAGATATGCCCTGAATGATATATATACATATACAGGGAGCATTTTGATAGCTGTAAATCCATTCACAAAGCTTCCTCATCTGTATGATACCCATATGATGGATCAGTATAGAGGAGCACCATTTGGTGAACTAAGTCCACATGTATTTGCTGTTGCTGATGCTTCTTATAGAGCAATGATGGATGAAGGTCAAAGCCAGTCTATTTTGGTCAGTGGTGAAAGTGGTGCGGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGGACAGTTGAACAACAAGTACTTGAATCCAATCCCCTCTTGGAGGCTTTTGGTAATGCCAGGACTGTCAGGAATGACAATTCTAGTCGCTTTGGGAAGTTTGTTGAAATTCAGTTCGATTCAAACGGTAGAATATCTGGAGCTGCTATTCGAACTTACTTACTGGAAAGGTCACGAGTAGTGCAGATAACAGATCCTGAAAGAAACTATCATTGCTTTTATCAGTTGTGTTCATCTGAAAGGGATGCTGAGAAGTATAAGTTAAGACATCCGAGCCACTTTCACTATCTAAATCAAAGTAAAACGTATGAACTAGAAGGTGTAAGCAGTGCTGAAGAATACATGAAGACAAGGAGGGCAATGGATATAGTTGGTATAAGCCATGAGGATCAGGAAGCCATATTTCGCACATTAGCTGGAATCTTACATTTGGGGAACATTGAATTTTCTCCTGGAAAAGAACATGACTCATCAGCAATAAAGGATGAGAAGTCAAGGTTTCATTTGCAGATGGCAGCAGATCTCTTCATGTGTGAAGTGAATCTACTGTTGGCAACATTGTGTACTCGCTCAATACAAACCCGTGAAGGAAATATCGTGAAAGCTCTTGATTGCAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCTAAAACTGTTTATGCTCGCCTATTTGACTGGCTAGTTGAAAAAATCAACAAGTCTGTTGGACAAGATAACAATTCCCGGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGCATTAACTTTGCAAATGAAAAGCTCCAGCAACATTTTAACGAGCATGTATTCAAGATGGAGCAGGAGGAGTACAGCAAGGAAGAAATTAACTGGAGTTACATTGAGTTTATTGACAACCAAGACGTTTTAGACTTGATTGAAAAGAAGCCTATTGGCATCATTGCACTCTTGGATGAAGCTTGCATGTTTCCAAAATCAAATCATCAAACATTCTCAACCAAGTTGTTCCAGCATTTCCGGTCCCACCCAAGGTTGGCAAAAGAAAAGTTCTCGGAAACTGATTTTACCATCTCTCATTATGCTGGAAAGGTCACTTACCATACAGATAGCTTCTTGGACAAAAATCGTGATTATGTTGTTGTTGAACATTGCAATCTATTGTCTTCTTCCAAATGCCCCTTCGTGTGTGATCTTTTCCCTCTGCTTCCAGAGGAATCTTCTTCTAGATCATCATACAAATTTTCTTCGGTAGCCTCCAGATTTAAGCAACAACTTCAAGCATTGATGGAGACTCTTAATACAACAGAGCCCCATTACATACGATGTGTGAAGCCAAATTCTTTGAATCGGCCACAAAGGTTTGAGAATTCAAGTGTGATACATCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGAATTAGTCTTGCGGGTTACCCCACTCGTAGGACTTACTCAGAGTTCATTGATCGCTTTGGGCTGATAGCTCCTGAATTTATGGATGGCAGTTATGATGAAAAAACTACCACCGCAAAAATTTTACGGAAGCTAAACCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATCGGCATTTTAGATTCCCGCCGTGCTGAAGTGTTGGACTACGCTGCAAAGTGTATTCAGCGTCGACTAAGAACATTTATTACTCACAGGGAATTTATCTCCATCCGTGCTGCTGCATTTTCTATTCAAGCATACTGCCGGGGATGTCTTGCTCGAAAGATGTATGCTGCTAAACGGGAGACATCTGCTGCTATTTTCATTCAGAAATATATTCGTATGTGGATAATGAAACAATCATACTTGAAACTATATTCTTCTTCTATAACCATACAATCCTTTATTCGTGGTTTCACAACTCGCCAAAGATTTGTTCATGGAAAAGAACACAGAGCTGCTACTGTTATTCAGGCTTGTTGGAAGATGTACAAAATTCGGTCAGTTTTCCAACATCGTCACACTTCAATTGTGGCAATACAATGTCTTTGGCGGTGTAAGCAAGCGAAAAGAGAGCTTCGCAGATTGAAAAAAGAGGCTAGTGAAGCTGGTGCCTTGCGTCTGGCCAAGAATAAACTTGAAAAGCAATTGGAAGATCTCACATGGCGATTGCATCTTGAAAAAAGATTAAGGGTTTCTAATGAAGAGGCTAAGCAAGTGGAGATGTCAAAACTTCAAAAGACACTAGAAGCTCTAAATCTTGAATTGGATGCAGCCAAATTAGCAACGATTAATGAGTGTAACAAGAATGCTATGCTTCAAAATCAATTGGAATTGTCAGTAAAGGAGAAATCGGCTTTGGAAAGGGAGCTAGTTGCAATGGATGAACTACGGAAAGAAAATGCTGCGCTAAAGAGTTCTTTGGATGCCTTCGAAAGGAAGAATGCAGCTTTAGAGCTTGAGCTTATGAAGGCGCAAAAAGTTAGTGATGAAACCATTGAGAAACTGGGGGAGGTTGAACGAAAATGTTCTCAATTCCAGCAAAATTTGAAAAGTCTTGAGGAGAAGTTGTCAACTTTGGAGGATGAAAATCATGTCCTCCGTCAGAAAGCTTTGAATCCATCTCCTAAGAGCAGCCGACCAGCTATCGCAAAGTCTTTTTCAGAAAAATACTCAAATTCAATAGCTCCCCGTACGGAAAGAAAACCTATATTTGAGTCACCCACTCCCACAAAACTTATTGCCCCATTTCCACTTGGCTTGTCAGACTCTCGTAGATCTAAGTTAACTGCAGAGAGACACCAGGATAACTATGAATTCCTCTCTAGATGTATCAAGGAAGAGTTGGGGTTCAAAAATGGTAAACCGTTGGCAGCATGCATCATTTACAGGTGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGAACAGCCATTTTTGATTACATAATTGAGGGAATTAATGAAGCCTTAAAGGCTAGAGATGATGACTCTCTCTTACCATATTGGCTGTCCAATACTTCCGCGCTTTTGTGCCTCCTACAAAGGAACCTACGTTCAAATGGCTTTCTAGCTACTACTGCCCAGCGTTATACGGGATCTTCTGGCTTGACCAGCCGAATTGGACATGGACTGAAATCTCCAATAAAATTCCTTGGATATGATGATGGTGTGTCACATGTAGAGGCAAGATATCCTGCTATACTTTTCAAACAACAGTTAACTGCTTGTGTAGAGAAGATTTTTGGCCTGATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTTTGAGCTCGTGCATTCAGGCACCAAAAACTGCACGGGTGCATGGGGGAAAATCATCCCGGTCTCCTAGTGGACTTCCTCAGCAATCTCCTGGTGGTCAGTGGGACAACATCATTAAATTTTTGGATTCACTTATGAGCCGACTACGTGGAAATCATGTACCATCATTCTTCATACGTAAACTAGTTACTCAAGTCTTCTCTTTCATCAATATTACACTCTTCAACAGCCTTCTGTTGCGGCGTGAATGTTGTACGTTCTCAAATGGGGAATACGTGAAATCCGGTCTAGCTGAACTGGAAAAGTGGATAGCTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCATGAGCTAAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATTCATCAAAAGAGGAAGAAATCCTTGGAAGAGATTCGACAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATCTATCGCATCAGTACTATGTACTGGGATGACAAGTACGGAACGCAGAGTGTATCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAAAATCTGACTTCAAATTCATTTTTGTTGGATGATGATCTGAGCATTCCATTTTCTGCTGAAGACATAGATATGGCGATATCTGCAATAGATCCCGATGACATTGATCACCCGCCATTTCTGCCGGAATATCCTTGCGCCCAGTTTCTTGTTGCACATTAG 4548 0.4138 MNFRHGSKVWVEDRNLAWVAAEVTGFAGKQVQLVTASGKKVSALPEKLFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYDTHMMDQYRGAPFGELSPHVFAVADASYRAMMDEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSSERDAEKYKLRHPSHFHYLNQSKTYELEGVSSAEEYMKTRRAMDIVGISHEDQEAIFRTLAGILHLGNIEFSPGKEHDSSAIKDEKSRFHLQMAADLFMCEVNLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVEKINKSVGQDNNSRMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSNHQTFSTKLFQHFRSHPRLAKEKFSETDFTISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKCPFVCDLFPLLPEESSSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQRFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFIDRFGLIAPEFMDGSYDEKTTTAKILRKLNLENFQLGRTKVFLRAGQIGILDSRRAEVLDYAAKCIQRRLRTFITHREFISIRAAAFSIQAYCRGCLARKMYAAKRETSAAIFIQKYIRMWIMKQSYLKLYSSSITIQSFIRGFTTRQRFVHGKEHRAATVIQACWKMYKIRSVFQHRHTSIVAIQCLWRCKQAKRELRRLKKEASEAGALRLAKNKLEKQLEDLTWRLHLEKRLRVSNEEAKQVEMSKLQKTLEALNLELDAAKLATINECNKNAMLQNQLELSVKEKSALERELVAMDELRKENAALKSSLDAFERKNAALELELMKAQKVSDETIEKLGEVERKCSQFQQNLKSLEEKLSTLEDENHVLRQKALNPSPKSSRPAIAKSFSEKYSNSIAPRTERKPIFESPTPTKLIAPFPLGLSDSRRSKLTAERHQDNYEFLSRCIKEELGFKNGKPLAACIIYRCLLHWHAFESERTAIFDYIIEGINEALKARDDDSLLPYWLSNTSALLCLLQRNLRSNGFLATTAQRYTGSSGLTSRIGHGLKSPIKFLGYDDGVSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKTARVHGGKSSRSPSGLPQQSPGGQWDNIIKFLDSLMSRLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAISAIDPDDIDHPPFLPEYPCAQFLVAH 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5507g00004 1515 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 Gene3D - 435 621 - -
Pral5507g00004 1515 Gene3D - 733 782 - -
Pral5507g00004 1515 Gene3D - 831 880 - -
Pral5507g00004 1515 Gene3D - 783 830 - -
Pral5507g00004 1515 Coils Coil 914 941 - -
Pral5507g00004 1515 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Pral5507g00004 1515 PANTHER MYOSIN 51 1449 - -
Pral5507g00004 1515 MobiDBLite consensus disorder prediction 1287 1306 - -
Pral5507g00004 1515 CDD MYSc_Myo11 73 718 IPR036018 -
Pral5507g00004 1515 Gene3D Kinesin motor domain 62 660 IPR036961 -
Pral5507g00004 1515 Coils Coil 1015 1049 - -
Pral5507g00004 1515 Coils Coil 865 909 - -
Pral5507g00004 1515 CDD MyosinXI_CBD 1111 1483 IPR037975 GO:0007015
Pral5507g00004 1515 Pfam Myosin head (motor domain) 61 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 SMART MYSc_2a 53 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 778 IPR027417 -
Pral5507g00004 1515 ProSiteProfiles Myosin motor domain profile. 59 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5507g00004 1515 FunFam Myosin heavy chain 249 303 - -
Pral5507g00004 1515 ProSiteProfiles IQ motif profile. 756 785 IPR000048 GO:0005515
Pral5507g00004 1515 Pfam DIL domain 1336 1439 IPR002710 -
Pral5507g00004 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 779 879 IPR027417 -
Pral5507g00004 1515 Pfam IQ calmodulin-binding motif 757 774 IPR000048 GO:0005515
Pral5507g00004 1515 Pfam IQ calmodulin-binding motif 830 849 IPR000048 GO:0005515
Pral5507g00004 1515 Pfam IQ calmodulin-binding motif 782 801 IPR000048 GO:0005515
Pral5507g00004 1515 Pfam IQ calmodulin-binding motif 807 824 IPR000048 GO:0005515
Pral5507g00004 1515 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Pral5507g00004 1515 Coils Coil 949 1007 - -
Pral5507g00004 1515 SMART iq_5 755 777 IPR000048 GO:0005515
Pral5507g00004 1515 SMART iq_5 851 873 IPR000048 GO:0005515
Pral5507g00004 1515 SMART iq_5 780 802 IPR000048 GO:0005515
Pral5507g00004 1515 SMART iq_5 803 825 IPR000048 GO:0005515
Pral5507g00004 1515 SMART iq_5 828 850 IPR000048 GO:0005515
Pral5507g00004 1515 ProSiteProfiles IQ motif profile. 829 858 IPR000048 GO:0005515
Pral5507g00004 1515 Gene3D - 665 731 - -
Pral5507g00004 1515 ProSiteProfiles Dilute domain profile. 1160 1460 IPR002710 -
Pral5507g00004 1515 Gene3D Myosin VI head, motor domain, U50 subdomain 308 599 - -
Pral5507g00004 1515 SMART DIL_2 1335 1442 IPR002710 -
Pral5507g00004 1515 Gene3D - 249 306 - -
Pral5507g00004 1515 MobiDBLite consensus disorder prediction 1291 1306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5507g00004 Pral-Chr5507 20500 46293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5507g00004 1 1513 Myosins gene family AT4G33200 74.373 0.0 2328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5507g00004 K10357 - gmx:100790815 2591.61