Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00044 ATGGAAGGAGCCTCTGCGTCCAATTCTGGTGCTGACATGGAACTAGTTTTCAGCGATTTCAGGGCTCGCAGACACGGTCTGATTAAGGCCCTCACAGAGGATTTTGATGAGTTCTATCGCCGGTGTGATCCCAGTAAACGTGGTGATTCGGAGGAGGAAGAGTTTCTTTGCCTATATGGATATCCCGATGGGCAGTGGATGGTGGAACCGCCGATGGAGGATGTTCCTACAGACCTTCCGGAGCCTGTATTGGGTATAAACTTAGCCAGAGATATGATGCCCAAAGAGGAATGGCTATCCTGGGTCGCTGCCCACAGCGATACTTGGTTACTCTCTGTGGCTTTCTTCATAGGCGCTCGCTTTGGATTTCGTCAGGCTCAAAGGCAGCAGCTGCATGATATGATTGAGGAGCTTCCAACAGTATCTGAGGTTGTCGTAGCTGAGATAAATAAGAAGAGGCAGCAGCAACGAAAACGAAAGAGAACTTCATCATCAGCTTCCATGCAAGAATCTTATAATGAGCGAGGAAGAAGTAAAAATATGGAGACAGAGACTTCGAAAGAAATGATGAAAGCAGAGGAGGAGGATGAGATAAAAGTGGAGTGGGTGCGTTGTTGGAGGTGTCACAGGCACTTCCATAGACAGTGTGTCCGCGATTTTTCTGCTAAGCCGCGCATTGACATTAACAACTTTCTATGTACCATCTGTCATTTGCCGTATGATACCCTCTGTCGTGTGCCGTATAAGTGA 750 0.476 MEGASASNSGADMELVFSDFRARRHGLIKALTEDFDEFYRRCDPSKRGDSEEEEFLCLYGYPDGQWMVEPPMEDVPTDLPEPVLGINLARDMMPKEEWLSWVAAHSDTWLLSVAFFIGARFGFRQAQRQQLHDMIEELPTVSEVVVAEINKKRQQQRKRKRTSSSASMQESYNERGRSKNMETETSKEMMKAEEEDEIKVEWVRCWRCHRHFHRQCVRDFSAKPRIDINNFLCTICHLPYDTLCRVPYK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00044 249 SUPERFAMILY FYVE/PHD zinc finger 201 237 IPR011011 -
Pral5505g00044 249 PANTHER CPG BINDING PROTEIN 13 236 IPR045104 GO:0006355|GO:0042393
Pral5505g00044 249 MobiDBLite consensus disorder prediction 175 191 - -
Pral5505g00044 249 MobiDBLite consensus disorder prediction 152 191 - -
Pral5505g00044 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 241 IPR013083 -
Pral5505g00044 249 Pfam Alfin 14 146 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00044 Pral-Chr5505 170975 173308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00044 1 174 Alfin-like Transcription Factor Family AT5G20510 46.703 1.58e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00044 K26274 - sind:105173651 185.267