Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00040 ATGACTGATGATAATTCACCTGAGGGAGACTTCATCAGCCATCAGTGGCCTTTGGAGCTCCCTGATTACTTGAAATTCGACGGCAATCATTGGCCAGACAATGATCCAGATCAGTGTTTTATTTCTGGTGGGCATTTTCCAAATCAGTTGATCTATCAAAGCTCCACTGAAGTAGGTGACTTGGGAGGAAGTGGCAGCCACGTTGAAGGGTCTTCCAGTTGTGGTAATACCAGAGATATCACAAATGGACGCCAGAAGAATGATGGTAGAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAGTACTGGATGATGGTTACAAATGGAGGAAGTATGGGAAGAAGAGGGTGAAGAATAGCCCCAATCCAAGGAATTACTACAGGTGTTCAGAAGAAGGATGCCCAGTGAAAAAGAGGGTGGAGCGAGATGGAGATGATCCCAGATATGTAATAACAACCTATGAAGGCATCCACACCCACAGCAGTTTTTACTAG 498 0.4478 MTDDNSPEGDFISHQWPLELPDYLKFDGNHWPDNDPDQCFISGGHFPNQLIYQSSTEVGDLGGSGSHVEGSSSCGNTRDITNGRQKNDGRERFAFRTRSEVEVLDDGYKWRKYGKKRVKNSPNPRNYYRCSEEGCPVKKRVERDGDDPRYVITTYEGIHTHSSFY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00040 165 MobiDBLite consensus disorder prediction 59 85 - -
Pral5505g00040 165 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5505g00040 165 SUPERFAMILY WRKY DNA-binding domain 96 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5505g00040 165 Pfam WRKY DNA -binding domain 105 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00040 165 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00040 165 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00040 165 FunFam WRKY transcription factor 57 90 164 - -
Pral5505g00040 165 MobiDBLite consensus disorder prediction 59 82 - -
Pral5505g00040 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 162 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00040 Pral-Chr5505 160307 161525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00040 51 164 WRKY Transcription Factor Family AT5G64810 57.895 9.76e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5505g00040 WRKY 5.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00040 - - gmx:100819462 200.675