Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00039 ATGACTGATGATAATTCACCTGAGGGAGACTTCATCAGCCATCAGTGGCCTTTGGAGCTCCCTGATTACTTGAAATTCGACGGCAATCATTGGCCAGACAATGATCCAGATCAGTGTTTTATTTCTGGTGGGCATTTTCCAAATCAGTTGATCTATCAAAGCTCCACTGAAGTAGGTGACTTGGGAGGAAGTGGCAGCCACGTTGAAGGGTCTTCCAGTTGTGGAGATATCACAAATGGACGCCAGAAGAATGATGGTAGAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAGTACTGGATGATGGTTACAAATGGAGGAAGTATGGGAAGAAGAGGGTGAAGAATAGCCCCAATCCAAGGAATTACTACAGGTGTTCAGAAGAAGGATGCCCAGTGAAAAAGAGGGTGGAGCGAGATGGAGATGATCCCAGATATGTAATAACAACCTATGAAGGCATCCACACCCACAGCAGTTTTTACTAG 489 0.4499 MTDDNSPEGDFISHQWPLELPDYLKFDGNHWPDNDPDQCFISGGHFPNQLIYQSSTEVGDLGGSGSHVEGSSSCGDITNGRQKNDGRERFAFRTRSEVEVLDDGYKWRKYGKKRVKNSPNPRNYYRCSEEGCPVKKRVERDGDDPRYVITTYEGIHTHSSFY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00039 162 SUPERFAMILY WRKY DNA-binding domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5505g00039 162 MobiDBLite consensus disorder prediction 60 82 - -
Pral5505g00039 162 Gene3D WRKY domain 88 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5505g00039 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 159 IPR044810 GO:0003700
Pral5505g00039 162 FunFam WRKY transcription factor 57 87 161 - -
Pral5505g00039 162 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00039 162 MobiDBLite consensus disorder prediction 60 80 - -
Pral5505g00039 162 Pfam WRKY DNA -binding domain 102 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00039 162 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00039 Pral-Chr5505 160307 161525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00039 71 161 WRKY Transcription Factor Family AT5G26170 68.132 7.86e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5505g00039 WRKY 5.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00039 - - gmx:100819462 199.134