Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00038 ATGACTGATGATAATTCACCTGAGGGAGACTTCATCAGCCATCAGTGGCCTTTGGAGCTCCCTGATTACTTGAAATTCGACGGCAATCATTGGCCAGACAATGATCCAGATCAGTGTTTTATTTCTGGTGGGCATTTTCCAAATCAGTTGATCTATCAAAGCTCCACTGAAGTAGGTGACTTGGGAGGAAGTGGCAGCCACGTTGAAGGGTCTTCCAGTTGTGATATCACAAATGGACGCCAGAAGAATGATGGTAGAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAGTACTGGATGATGGTTACAAATGGAGGAAGTATGGGAAGAAGAGGGTGAAGAATAGCCCCAATCCAAGGAATTACTACAGGTGTTCAGAAGAAGGATGCCCAGTGAAAAAGAGGGTGGAGCGAGATGGAGATGATCCCAGATATGTAATAACAACCTATGAAGGCATCCACACCCACAGCAGTTTTTACTAG 486 0.4486 MTDDNSPEGDFISHQWPLELPDYLKFDGNHWPDNDPDQCFISGGHFPNQLIYQSSTEVGDLGGSGSHVEGSSSCDITNGRQKNDGRERFAFRTRSEVEVLDDGYKWRKYGKKRVKNSPNPRNYYRCSEEGCPVKKRVERDGDDPRYVITTYEGIHTHSSFY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00038 161 Gene3D WRKY domain 87 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5505g00038 161 ProSiteProfiles WRKY domain profile. 95 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00038 161 SMART WRKY_cls 100 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5505g00038 161 SUPERFAMILY WRKY DNA-binding domain 92 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5505g00038 161 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 158 IPR044810 GO:0003700
Pral5505g00038 161 MobiDBLite consensus disorder prediction 59 80 - -
Pral5505g00038 161 MobiDBLite consensus disorder prediction 59 79 - -
Pral5505g00038 161 FunFam WRKY transcription factor 57 86 160 - -
Pral5505g00038 161 Pfam WRKY DNA -binding domain 101 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00038 Pral-Chr5505 160307 161525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00038 51 160 WRKY Transcription Factor Family AT5G64810 57.895 2.27e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5505g00038 WRKY 5.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00038 - - gmx:100819462 203.371