Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00036 ATGGAGGAGATGTTTTCTGCGATTGCAGTGCCATTGAGAGTAGGTAATTCAGTTTGTGATAACCCGAACATAGCTACCCATATGGATGTGTCCAGACTTAAGCTGATGGCAGATGCTGGATTGTTATCTAATTCGATATCTAAGGTCTCAACTGAGACAGTTGCAGATTCTGATGAGGATCGTAATGGTGGGAATCTGGAGAACCAAGTTAGCATTACTGCAGTCTCATCACCAAAACTTGATAGGGAGGAAGAAATTCCTTTGTTGGATACCATATCCCAAAATAAAAGCACACCAGTTGCTGGTGGTGAAGTTTTAACCCCAGAAACTGAGGATGATGATACAATATCATTGGAGGGTGATCAGATCATTGACAGCTCTTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGCATATGTGGAGAGGAGTCGGTCAATTTTGAGGCTACTTCTGAGATAAAGACTCCAAGTGCTATTGACATGGAGAAGAGCATCTGTGCCCAACCTGCTGATTTAGATGAGTCTAATGTTGAGCCAGAAAGTGTTGGTGAACCCCTTGCTGTGGCAGTGAGCCTTGAAGAAGATTCTAGAGTTGGATCTGGCCCAGAGTCTTCTGCGGTTGTTCTTCAGCTGCCTCTAGAAAAAGTGGTGAGTGGAACAGTTGGTCGTAGTGTTTTCGAATTAGATTATGCCCCACTTTGGGGATTCATTTCCATGTGCGGAAGAAGACCAGAGATGGAAGATGCTGTCGCAACTGTGCCTCAATTTATGAAAATTCCTATTCAAATGCTAATCAGTGACAGGGTAATTGATGGAATGAGCAAGTGCTTGAGTCAGCAGACAACTCATTTCTTTGGAGTTTATGATGGCCACGGTGGCTCTCAGGTGGCAAATTATTGTCGTGACCGTGTTCATTGGGCTTTGGCTGAGGAAATAGAATTTGTGAAAGAAGGTCTAATAAATGGAGGTATCAAGGATGGCATTCAAGATCAATGGAAAAAGGCCTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAGCTAACCGTGAACCTGTTGCCCCTGAAACTGTTGGTTCGACTGCTGTTGTTGCTATTATTTGTGCATCTCATATCATTGTTGCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGCAAAGAACCCGTGGCATTGTCAGTGGATCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTGTTTGGTGTTCTTGCAATGTCAAGGTCTATAGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTCATGTTTCTTCCTCGTGCGAAAGATGATGAATGCCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGTCAAACGAAGAGGCATGTGACCTAGCTCGAAGACGAATACTTATGTGGCACAAGAAAAACGGTGTTGCAGTAGCCTCAGAGAGGGGAGAGGGTGCTGACCCTGCTGCACAAGCAGCGGCAGAGTACCTGTCAAACCGTGCTCTCCAGAAAGGAAGCAAAGATAACATCACCGTAATTGTGGTGGATTTGAAAGCTCAAAGGAAATTTAAGAGCAAGACATGA 1644 0.4404 MEEMFSAIAVPLRVGNSVCDNPNIATHMDVSRLKLMADAGLLSNSISKVSTETVADSDEDRNGGNLENQVSITAVSSPKLDREEEIPLLDTISQNKSTPVAGGEVLTPETEDDDTISLEGDQIIDSSCSLSVVSENSSICGEESVNFEATSEIKTPSAIDMEKSICAQPADLDESNVEPESVGEPLAVAVSLEEDSRVGSGPESSAVVLQLPLEKVVSGTVGRSVFELDYAPLWGFISMCGRRPEMEDAVATVPQFMKIPIQMLISDRVIDGMSKCLSQQTTHFFGVYDGHGGSQVANYCRDRVHWALAEEIEFVKEGLINGGIKDGIQDQWKKAFTNCFLKVDAEVGGKANREPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPVALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMSNEEACDLARRRILMWHKKNGVAVASERGEGADPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00036 547 PANTHER PROTEIN PHOSPHATASE 175 537 IPR015655 GO:0004722|GO:0006470
Pral5505g00036 547 FunFam Protein phosphatase 2C 16 221 547 - -
Pral5505g00036 547 CDD PP2Cc 238 537 IPR001932 -
Pral5505g00036 547 ProSitePatterns PPM-type phosphatase domain signature. 284 292 IPR000222 GO:0043169
Pral5505g00036 547 Pfam Protein phosphatase 2C 266 530 IPR001932 -
Pral5505g00036 547 SMART PP2C_4 219 535 IPR001932 -
Pral5505g00036 547 SUPERFAMILY PP2C-like 229 538 IPR036457 -
Pral5505g00036 547 Gene3D - 220 547 IPR036457 -
Pral5505g00036 547 ProSiteProfiles PPM-type phosphatase domain profile. 233 537 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00036 Pral-Chr5505 154284 159322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00036 1 547 PP2C-type Phosphatase Gene Family AT1G17550 49.107 1.44e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00036 K14497 - gmx:100805281 824.313