Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00019 ATGATGACTCCAGATGATGGCGACCAGGCAAAAAGAAGATCAAAATCGGGACAAGAATCAGTGAATCCAAATTCTTGGTTGATGAACTTTAACCGTGATCTGATGGCCGGAGCAGTCGTGGGTGGGGTGGTCCACACCGTCGTGGCTCCAATTGAGAGGGCGAAGCTTTTGTTGCAGACCCAAGAAAGCAATATGGCCATTGTTGCCAATGGGCGTCGGAAATTCAAGGGCTTGTTGGATTGTATAGTCCGTACCGTCAAAGAAGAAGGCTTTCTCTCTTTGTGGAGAGGCAATGGCAGCAGTGTTCTTCGCTATTATCCTTCTGTCGCACTCAATTTCTCGCTCAAGGATCTATACAAAAACATATTGAGGAGTGGAAACTCGCGTGAGAGTAATTTTCTGTCAGGAGCATCCGCTAATTTTGTTGCTGGTGCTGGAGCCGGCTGTACAGCACTGATCGTAGTATATCCACTTGATATTGCACACACCCGCCTTGCTGCGGACATAGGACGAACAGAGAAACGTCAATTTCAAGGCATACACCATTTCTTGGCCACAATATTGAGAAAGGATGGGATCAGAGGGATTTACAAGGGCCTCCCTGCCTCTTTGCAAGGAATGGTGGTGCATCGAGGAATTTACTTTGGAGGCTTCGATACCATAAAAGAAAAATTATCTGAAGAATCAGAAGGCAAGTTAGCTCTGTGGAAACGTTGGGTGGTGGCTCAGGCAGTGACATCATCAGCTGGGTTGATATCATATCCATTAGACACAGTTCGGAGGAGGATGATGATGCAGTCCGGCATGGAACACCCCGTGTACAGTAACACCCTCGACTGTTGGAAGAAAATATATAGGACGGAAGGTCTTGTTTCATTTTATCGGGGGGCTGTCTCCAACATGTTCAGGAGCATCGGAGCTGCCGCCGTGTTAGTCTTGTACGATGAGGTCAAGAAGTTCATGGATTTGGGTCCATTGTAA 981 0.472 MMTPDDGDQAKRRSKSGQESVNPNSWLMNFNRDLMAGAVVGGVVHTVVAPIERAKLLLQTQESNMAIVANGRRKFKGLLDCIVRTVKEEGFLSLWRGNGSSVLRYYPSVALNFSLKDLYKNILRSGNSRESNFLSGASANFVAGAGAGCTALIVVYPLDIAHTRLAADIGRTEKRQFQGIHHFLATILRKDGIRGIYKGLPASLQGMVVHRGIYFGGFDTIKEKLSEESEGKLALWKRWVVAQAVTSSAGLISYPLDTVRRRMMMQSGMEHPVYSNTLDCWKKIYRTEGLVSFYRGAVSNMFRSIGAAAVLVLYDEVKKFMDLGPL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00019 326 SUPERFAMILY Mitochondrial carrier 28 316 IPR023395 -
Pral5505g00019 326 PRINTS Mitochondrial carrier protein signature 97 117 IPR002067 GO:0055085
Pral5505g00019 326 PRINTS Mitochondrial carrier protein signature 242 264 IPR002067 GO:0055085
Pral5505g00019 326 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Pral5505g00019 326 PRINTS Mitochondrial carrier protein signature 46 60 IPR002067 GO:0055085
Pral5505g00019 326 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
Pral5505g00019 326 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Pral5505g00019 326 MobiDBLite consensus disorder prediction 1 15 - -
Pral5505g00019 326 Gene3D Mitochondrial carrier domain 27 321 IPR023395 -
Pral5505g00019 326 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 25 321 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral5505g00019 326 FunFam probable ADP,ATP carrier protein At5g56450 32 323 - -
Pral5505g00019 326 Pfam Mitochondrial carrier protein 138 227 IPR018108 -
Pral5505g00019 326 Pfam Mitochondrial carrier protein 233 321 IPR018108 -
Pral5505g00019 326 Pfam Mitochondrial carrier protein 30 124 IPR018108 -
Pral5505g00019 326 PRINTS Adenine nucleotide translocator signature 108 120 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral5505g00019 326 PRINTS Adenine nucleotide translocator signature 135 148 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral5505g00019 326 PRINTS Adenine nucleotide translocator signature 75 96 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral5505g00019 326 PRINTS Adenine nucleotide translocator signature 238 254 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral5505g00019 326 PRINTS Adenine nucleotide translocator signature 30 42 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral5505g00019 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 320 IPR018108 -
Pral5505g00019 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 122 IPR018108 -
Pral5505g00019 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 224 IPR018108 -
Pral5505g00019 326 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00019 Pral-Chr5505 66093 68787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00019 27 318 Antiporters AT3G08580 40.268 9.83e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00019 K05863 - qsa:O6P43_015892 517.694