Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5505g00005 ATGCCCAGAATGAAGCATCTGCTTAGAAAACTTCATATTGGTGGCGGTATAAATGATCACCAGAGATTATCGCCGGAGACTGCCCCAGTGCTCAGCCCCACTCCCAGTCTCACTCTATCCTCGTCTGCTTTGTCGTCCCCTACAATGCCTACCGTCACTACAACTGAATCGGCTGCTGATCGGGCGGCTGTTGATGTTACCGCTGACGTTGGTGGCGATAAGGGAGTAGATTTCAATTTCATGGAGGAGGAGTTTCAGATGCAGTTGGCTTTGGCAATTAGTGCTTCTGATTCTGATGGCCGCAAGGACCCCGATTCTGCTCAGATCGATGCTGCCAAGCAGATGAGCCTCGGGTGTCAGACATCTGTTACTGACACGAAAGCGCTCGTTCAGTTTCAATCTCTTCGTTATTGGAACTACAGTCTCATTGACTACGAAGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATAACCCCAAATTTAGTTGAACGAGGAAGGATGCCATTGTTGATTGATCTGCAAACTACGTCCGTCTCAGAAAATCTTGAACGTGAAGTGATTTTGGTGAACCGCATGGTTGATAATGAGCTGAAGCAGCTTGAGAAAAAAGCCTATAAATTATTAAAGAACTTCCACTTTTCTGAACAGGGACTAATCTTAAGTGGCCTACTTCAGAAACTTGCTGACATTGTGGTTAATAGAATGGGTGGTCCAGTTGGTGATGCTGATGAAATTTTGAAAAGGTGGACCATGAGGAGCCGTGAGTTAAGAAATTCATTAAGAACCAGTGTTCTTCCCATTGGCTGTCTTGATGTTGGACTTTCACGTCACCGTGCCCTACTTTTCAAGGTACTTTCAGATAGAATTAATGTTCCCTGTTTGCTGGTCAAAGGGAGTTACTACACTGGAACTGATGATGGAGCTGTGAATTTGATCAAAGCTGATGATGGGAGTGAATTCATTATTGATCTGATGGGTGCTCCTGGTGCTCTTATTCCTGCCGAAATACCCAGCAGTCAGCTTCAAAACTACAGTTTTCCTGTAAGGAGCTGTACAGATATTGTGGAGGTATCAAAAGACGCACATTTGATGTTAGATGACGGAAGTAGAATGCTGGCAGTTTCTGGAAGATGTTCAGCGGTAGGCACCGCTTGGCCAGAAGAATTAATAAGTGTTGGCAGTAAAAAAATACCAGTTGAAAGGAATTCTGTTGGAATGAATCAAGCAGAGAGGTCTGAGCATAAATTTGGGAATCATCTTCAGTCACTGCATAAATCAGGTGAAAGCTCTTCAGGTGCAAAAGCATCACCAGCAGGAAAAAAGCAAGCGAAAGATGTATCAACAGGCCCAGATTTTGCTCAAAACTTACACATTGTTCAATTAGAAAATTATGCACTACCTTCATCGGATCTCTTTTCACATATTAATACACAAAATACAGCTCAAGATAAAGTGTTTGAAGATTTTCCTCAGGTTACTGAAAAAATTGTCAAAAATTCTGTCCAAGCTGATCCAGATAAGTTGTTATCAAGCTGTGAAAAGTCTGTCAAATCCCCTCAAGGGGTGTGCTCTACCAGTGATAATGCGAGGAAGGTGCCAGATACTTTCTGTAATGGAATTGAAGAACTGGAGCAGCTAGAAGCATTAGACATAGAAAGCGCTTCATCCAATGCTCATCAGAAGCATGAAGAGCAATTTCTTGAGTCGTCCTTGCCCAGAGCAGCTGTGTCTTGCAAAAGACAAAGAGGGGTTAACTTTGTTTGCGACGATGATGAAAATCTTCTTAATAATAAGGCTGTAGAGGCTTTTAATGACACTGAATTGGATAAGGCTTCTGCTGTCCAATTAAATGAAACAGCTAATGGAGATCACACTAAATATGATGGCAAAAGTGATAAAGTTAATGCAGTTCTAGGTGAGGGCGTAGAATGGGAGATTCAATGGGAGGATCTTCAAATTGGTGAGCGAATTGGTATTGGTTCCTATGGTGAGGTCTATCATGCTGACTTGAAAGGCACCGAAGTGGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGTGATGCATTGGCTCAGTTTAAATCGGAAGTTGAGATAATGTTGAGACTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACCCGACCCCCACATTCCTCTATCTTGACAGAGTTTCTCCCAAGAGGAAGTCTATATAGGCTATTACACCGACCCAATTTTCGACTTGAAGAGAAGAGACGGTTGCGTATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCACACAAGCCATCCTCCCATTGTCCATCGGGATTTGAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGCTTGTCCCGCTTGAAGCACCATACCTTTTTGTCTTCAAAGTCTACTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGGCTACCACGAGGATCCCATGGAAGGGGTTGAACCCAATGCAGGTTGTTGGAGCTGTCGGGTTTCAAAATAGACGGCTTGAAATTCCAGAGGATGTTGATCCAGTAGTAGCACAAATTATATGTGATTGTTGGCAAACGGAGCCACACTTGCGACCATCATTCTCACAGATCATGTCTCGTCTCCGCCACCTTCGGCGCCTGGTTGTTAGAACAGATTCGACTGAAAAACCAAATGAAGTTGGCCATAGTACCAAATTATTGAGATGA 2799 0.4323 MPRMKHLLRKLHIGGGINDHQRLSPETAPVLSPTPSLTLSSSALSSPTMPTVTTTESAADRAAVDVTADVGGDKGVDFNFMEEEFQMQLALAISASDSDGRKDPDSAQIDAAKQMSLGCQTSVTDTKALVQFQSLRYWNYSLIDYEEKVMDGFYDVYGITPNLVERGRMPLLIDLQTTSVSENLEREVILVNRMVDNELKQLEKKAYKLLKNFHFSEQGLILSGLLQKLADIVVNRMGGPVGDADEILKRWTMRSRELRNSLRTSVLPIGCLDVGLSRHRALLFKVLSDRINVPCLLVKGSYYTGTDDGAVNLIKADDGSEFIIDLMGAPGALIPAEIPSSQLQNYSFPVRSCTDIVEVSKDAHLMLDDGSRMLAVSGRCSAVGTAWPEELISVGSKKIPVERNSVGMNQAERSEHKFGNHLQSLHKSGESSSGAKASPAGKKQAKDVSTGPDFAQNLHIVQLENYALPSSDLFSHINTQNTAQDKVFEDFPQVTEKIVKNSVQADPDKLLSSCEKSVKSPQGVCSTSDNARKVPDTFCNGIEELEQLEALDIESASSNAHQKHEEQFLESSLPRAAVSCKRQRGVNFVCDDDENLLNNKAVEAFNDTELDKASAVQLNETANGDHTKYDGKSDKVNAVLGEGVEWEIQWEDLQIGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHSSILTEFLPRGSLYRLLHRPNFRLEEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRLKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATTRIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPVVAQIICDCWQTEPHLRPSFSQIMSRLRHLRRLVVRTDSTEKPNEVGHSTKLLR 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5505g00005 932 MobiDBLite consensus disorder prediction 424 438 - -
Pral5505g00005 932 CDD STKc_MAP3K-like 659 905 - -
Pral5505g00005 932 PRINTS Tyrosine kinase catalytic domain signature 876 898 IPR001245 GO:0004672|GO:0006468
Pral5505g00005 932 PRINTS Tyrosine kinase catalytic domain signature 727 740 IPR001245 GO:0004672|GO:0006468
Pral5505g00005 932 PRINTS Tyrosine kinase catalytic domain signature 766 784 IPR001245 GO:0004672|GO:0006468
Pral5505g00005 932 PRINTS Tyrosine kinase catalytic domain signature 832 854 IPR001245 GO:0004672|GO:0006468
Pral5505g00005 932 PRINTS Tyrosine kinase catalytic domain signature 813 823 IPR001245 GO:0004672|GO:0006468
Pral5505g00005 932 Coils Coil 192 212 - -
Pral5505g00005 932 FunFam Serine/threonine-protein kinase CTR1 732 915 - -
Pral5505g00005 932 Pfam Protein tyrosine and serine/threonine kinase 653 905 IPR001245 GO:0004672|GO:0006468
Pral5505g00005 932 MobiDBLite consensus disorder prediction 423 450 - -
Pral5505g00005 932 MobiDBLite consensus disorder prediction 16 57 - -
Pral5505g00005 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Pral5505g00005 932 FunFam Serine/threonine-protein kinase isoform 1 644 731 - -
Pral5505g00005 932 Pfam Ethylene-responsive protein kinase Le-CTR1 131 334 - -
Pral5505g00005 932 Gene3D Phosphorylase Kinase; domain 1 646 730 - -
Pral5505g00005 932 SUPERFAMILY Protein kinase-like (PK-like) 643 905 IPR011009 -
Pral5505g00005 932 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 100 914 - -
Pral5505g00005 932 MobiDBLite consensus disorder prediction 25 57 - -
Pral5505g00005 932 SMART serkin_6 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5505g00005 932 ProSiteProfiles Protein kinase domain profile. 653 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5505g00005 932 Gene3D Transferase(Phosphotransferase) domain 1 732 916 - -
Pral5505g00005 932 ProSitePatterns Protein kinases ATP-binding region signature. 659 681 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5505g00005 Pral-Chr5505 11594 19255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5505g00005 1 919 MAP Kinase Kinase Kinase AT5G11850 52.537 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral5505g00005 PK_Tyr_Ser-Thr 1.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5505g00005 K04424 - gmx:100779137 1077.39