Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral549g00013 ATGGGAATAATAGGTGATATCCCTTCTTCCATTTTCAATTTGACAAATCTAGAAGAGTTTGATGTTTCTCAAAATCAACTAATTGGTGGCATACCAATAAAGTTTGAATATTTATATTCTCTTTCTCTTCTAAATGTCTCCCAAAACAAGCTGAGTGGAATTGTGCCTTACTTTAGGAACAGGTTCAATGACAATTTTCATGTTGACTTTAGTCACAACAAAATCAATAGACTATTACCATCTGGGATATGCACTTTTCCATCAAAATGTAGCATTGATTTGAGCTACAATAATATCTCTGGTAATATACCTAGAGAGCTTGGTGAGCTGCTCTACATCAACTTGTCATACAATCATCTCAGCGGCTATGTCCCTAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAAAGAATTACTTGGTCTAGAGAAGATATATGATTCTTCTAAAGATTCAAAGTCTTTGTTGAAAATCATTATTCCTTTGACAATTTTTGTTGTCATCATATTTGTTGGGGGTTTCATCTGGTTTCATTCTTTCAAAAAGAACAAGAAATTCATAATTGAGACAAGAGAAACAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGAAAAATTGCATATGAAAATATTATAGAAGCAACAGAGGACTTTGACATCAAATATTGTATTGGAACTGGTTCCTATGGAAGTGTTTATAGAGCACAACTTCCTAGTGGCAAAATTGTAGCATTAAAAAAACTCCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATTATAAAGCTTCATGGTTTTTGCATACATAATCAGTGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGACGAAGCTAAAGAGTTGGATTGGGGTAAGAGAGTGAATGTCATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGATTGCGTTCCTCCAATTATCCATCGAGACATAACAAGTAGTAATATATTGTTCAACTCAAAGATGGAGGCTTTTCTATCTGACTTTGGCACAGCTAAAATCATTGATCCAGATACATCTAATCAAACTCTTCTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTGGCTGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTTACAATGGAAACAATTATGGGAAAACATCCTGGAGATTTAATATCATCTTTTTCAAAGGCCAACACTGAAAGCATTTTGCTAAAGGATGTGCTAGACCCACATGTCCAGCTGCCATCACAAAAAGATGCAAGAGATGTGACTCTTTTGGTCACAATAGCATTAGCATGCTTAAATCCATCTCCCAAATCTCGACCAACAATGCAACAAGTGTCTCAAAAGCTTTTATCCTCCGACTTGCCACTAACCACTCCTTTCAATGATATCTCAATCCAGCATTTACTAAATCAAGATATGCAAATAATCTAG 1554 0.3468 MGIIGDIPSSIFNLTNLEEFDVSQNQLIGGIPIKFEYLYSLSLLNVSQNKLSGIVPYFRNRFNDNFHVDFSHNKINRLLPSGICTFPSKCSIDLSYNNISGNIPRELGELLYINLSYNHLSGYVPSEVYSSFPHDILNGNKELLGLEKIYDSSKDSKSLLKIIIPLTIFVVIIFVGGFIWFHSFKKNKKFIIETRETKNGDLFSIWNYDGKIAYENIIEATEDFDIKYCIGTGSYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIIKLHGFCIHNQCMFLIYEYMERGSLFYVLNNDDEAKELDWGKRVNVIKGIANALFYMHHDCVPPIIHRDITSSNILFNSKMEAFLSDFGTAKIIDPDTSNQTLLVGTYGYVAPELAYTLAVTEKCDVYSFGVVTMETIMGKHPGDLISSFSKANTESILLKDVLDPHVQLPSQKDARDVTLLVTIALACLNPSPKSRPTMQQVSQKLLSSDLPLTTPFNDISIQHLLNQDMQII 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral549g00013 517 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Pral549g00013 517 ProSitePatterns Tyrosine protein kinases specific active-site signature. 348 360 IPR008266 GO:0004672|GO:0006468
Pral549g00013 517 PANTHER LEUCINE RICH REPEAT KINASE 2 5 497 - -
Pral549g00013 517 Gene3D Ribonuclease Inhibitor 2 158 IPR032675 -
Pral549g00013 517 SUPERFAMILY L domain-like 3 126 - -
Pral549g00013 517 SUPERFAMILY Protein kinase-like (PK-like) 207 490 IPR011009 -
Pral549g00013 517 FunFam MDIS1-interacting receptor like kinase 2 303 495 - -
Pral549g00013 517 Gene3D Transferase(Phosphotransferase) domain 1 303 496 - -
Pral549g00013 517 Gene3D Phosphorylase Kinase; domain 1 185 302 - -
Pral549g00013 517 FunFam Leucine-rich repeat receptor protein kinase MSP1 186 302 - -
Pral549g00013 517 ProSiteProfiles Protein kinase domain profile. 224 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral549g00013 517 Pfam Protein kinase domain 228 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral549g00013 Pral-Chr549 92768 104284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral549g00013 5 396 Receptor kinase-like Gene Family AT4G08850 43.447 1.91e-100 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral549g00013 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral549g00013 - - pcin:129297054 771.155