Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral549g00012 ATGGCCCTGATCTTGCACGCACGCAGAACAAACAAAAATACATACAAGATATTCATAACAGCAGAGTATAGTGGTGTGGAAGTTAAATTGGCGCCAAATTTTGAGATGGGTGTTTCTAATAAAACTCCTCAATATCTCAAGATGAACCCTATTGGCAAGGTTCCTGTGTTGGAAACTGCAGATGGTCCAATCTTTGAGAGTAATGCTGTTGCTCGCTATGTTGCTCGATTGAAACCTGACAATGCTTTGTACGGGTCTTCTCTCATTGTTCACGCTCAAATTGAACAGTGGATTGACTTCTCCACATTAGAGATTGATGGCAATATTAATGATTGGTATAGGCCAAGAATGGGACAAGCCCCTTATCATCCTCCGGTTGAGGAATTTAAAATTTCAGCATTGAAGAGAGCACTGGGGGCGTTGAACACTCACCTTGCTTCTAACAAGTATCTGGTTGGCCAATCTCTGACGTTAGCTGACATTATTATGACTTGCAATTTGTACAGAGGTTTCACTCGCCTCATGACCAAGAGCTTCACTTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGGCCTTGGTCAATGAGCCCAATTTCCACAAGATCATTGGTGAGGTTAAGCAGACTGAGGCTACTATACCTATATTGCCTCAACAGAAGCCCAAAGAATCTGCCAAGCAGGCCCAACCAAAGTAG 696 0.4282 MALILHARRTNKNTYKIFITAEYSGVEVKLAPNFEMGVSNKTPQYLKMNPIGKVPVLETADGPIFESNAVARYVARLKPDNALYGSSLIVHAQIEQWIDFSTLEIDGNINDWYRPRMGQAPYHPPVEEFKISALKRALGALNTHLASNKYLVGQSLTLADIIMTCNLYRGFTRLMTKSFTSEFPHVERYFWALVNEPNFHKIIGEVKQTEATIPILPQQKPKESAKQAQPK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral549g00012 231 Gene3D - 80 214 - -
Pral549g00012 231 Pfam Glutathione S-transferase, C-terminal domain 133 197 IPR004046 -
Pral549g00012 231 FunFam Elongation factor 1B gamma 1 74 - -
Pral549g00012 231 SFLD Glutathione Transferase (cytosolic) 5 191 IPR040079 -
Pral549g00012 231 CDD GST_N_EF1Bgamma 5 77 - -
Pral549g00012 231 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Pral549g00012 231 CDD GST_C_EF1Bgamma_like 91 210 - -
Pral549g00012 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Pral549g00012 231 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Pral549g00012 231 SFLD Main (cytGST) 5 191 - -
Pral549g00012 231 Gene3D Glutaredoxin 1 74 - -
Pral549g00012 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 213 IPR010987 -
Pral549g00012 231 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Pral549g00012 231 FunFam Elongation factor 1 gamma 80 215 - -
Pral549g00012 231 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 227 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral549g00012 Pral-Chr549 14978 18616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral549g00012 1 230 Eukaryotic Initiation Factors Gene Family AT1G57720 61.702 4.89e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral549g00012 K03233 - zju:107412556 351.288