Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5496g00010 ATGTCAAAACAGGACACACATTATGCTGCCAATGACGATCATCAGGAAAGAATGGAACCCTTTCCTCCTTGCATAGAAATACCGTCTGATGGAACTGATGTCTGGGAAATTAATACCAACCTATTGAAATTTGAAAACAAAGTTGGCTCTGGATCATTCGGTGACTTGTACAAAGGCACATATTGCAGTCAAATTGTGGCTATCAAAGTCCTCAAACCTGAGCGCACAAATACAGATATGTTGAGAGAGTTTGCACAAGAAGTTTATATCATGAGGAAGATTCGACACAGGAATGTTGTGCAATTCATTGGAGCATGTACTCGACCACCAACTCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCCTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAGTTATTTGCACCAAAATAATATCATACACAGGGATCTCAAGACTGCCAATCTGCTGATGGATGAAAATGAAGTGGTGAAGGTAGCGGATGGAGTTGCCAGAGTGAAGATAGAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCCCCAGAGGTCATTGAACACAAACCTTATGATCAGAAAGCAGATGTCTTCAGTTTTGGAATAACTCTTTGGGAGCTTCTAACCGGAGAACTGCCTTACTCTTACCTGACTCCATTACAAGCAGCAGTAGGCGTGGTGCAAAAGGGTCTAAGACCGACAATCCCCAGGAGCATACACCCAAGACTTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCAGAATTCTCCGAGATAATAGAGATTCTTCAGCTGATAGTTAAAGAGGTTACTGGTGAAAAAGCCGATCGCCATAAATCATCCCACGGCTTTCTCTCAGCACTTAAATGGGGCCATCACTGA 963 0.4237 MSKQDTHYAANDDHQERMEPFPPCIEIPSDGTDVWEINTNLLKFENKVGSGSFGDLYKGTYCSQIVAIKVLKPERTNTDMLREFAQEVYIMRKIRHRNVVQFIGACTRPPTLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDENEVVKVADGVARVKIESGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGITLWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPRSIHPRLSELLQRCWQQDPKDRPEFSEIIEILQLIVKEVTGEKADRHKSSHGFLSALKWGHH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5496g00010 320 MobiDBLite consensus disorder prediction 1 20 - -
Pral5496g00010 320 SUPERFAMILY Protein kinase-like (PK-like) 21 290 IPR011009 -
Pral5496g00010 320 Pfam Protein tyrosine and serine/threonine kinase 42 290 IPR001245 GO:0004672|GO:0006468
Pral5496g00010 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Pral5496g00010 320 PRINTS Tyrosine kinase catalytic domain signature 198 208 IPR001245 GO:0004672|GO:0006468
Pral5496g00010 320 PRINTS Tyrosine kinase catalytic domain signature 217 239 IPR001245 GO:0004672|GO:0006468
Pral5496g00010 320 PRINTS Tyrosine kinase catalytic domain signature 116 129 IPR001245 GO:0004672|GO:0006468
Pral5496g00010 320 PRINTS Tyrosine kinase catalytic domain signature 261 283 IPR001245 GO:0004672|GO:0006468
Pral5496g00010 320 PRINTS Tyrosine kinase catalytic domain signature 153 171 IPR001245 GO:0004672|GO:0006468
Pral5496g00010 320 FunFam Serine/threonine-protein kinase isoform 1 32 120 - -
Pral5496g00010 320 Gene3D Transferase(Phosphotransferase) domain 1 121 313 - -
Pral5496g00010 320 CDD STKc_MAP3K-like 48 290 - -
Pral5496g00010 320 ProSitePatterns Protein kinases ATP-binding region signature. 48 69 IPR017441 GO:0005524
Pral5496g00010 320 ProSiteProfiles Protein kinase domain profile. 42 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5496g00010 320 PIRSF ILK 13 310 - -
Pral5496g00010 320 MobiDBLite consensus disorder prediction 1 22 - -
Pral5496g00010 320 SMART serkin_6 42 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5496g00010 320 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 295 - -
Pral5496g00010 320 Gene3D Phosphorylase Kinase; domain 1 31 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5496g00010 Pral-Chr5496 49943 55430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5496g00010 19 319 MAP Kinase Kinase Kinase AT4G35780 74.917 1.66e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5496g00010 PK_Tyr_Ser-Thr 2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5496g00010 - - gmx:100803377 549.666