Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5496g00009 ATGATGACGACGTCGATTCGTATCTCCGGCTTCCTCCTCTCTCCTCCTCTCCGCTCCGCCAAGCTGGATCATGCTCCAAGAATTTCATTTCTGAAACCGTTGAAGTCTCGTCAGGCGCGGAGCGTTAGTGTTGTTAAAGCCAACTTTCCAAACTACTGCACGAAAGCTGCTCTGAACGGGAATTTGGAGACCGTCGGAGTTCCGACGTCGGTGCCAGTGCGTGTAGCCCATGAGCTGCTTCTTGCTGGACATCGCTATTTGGATGTGAGAACTCCCGAAGAATTCAACGCAGGACACGCTCCAGGCGCAATTAACGTACCATACATGTACAGAGTTGGATCAGGTATGACAAAGAATGCCAATTTTGTTGCAGAAGTCTCATCACATTTTAGAAAAGATGATGAGATTATTGTTGGTTGTCAACTTGGTAAAAGGTCCATGATGGCTGCTACTGACTTGTTAGTTGCTGGATTTTCTGGAATTACAGACATAGCTGGTGGATTCGCTGCTTGGACTCAAAATGGACTTCCAACAGAACAGTGA 543 0.4733 MMTTSIRISGFLLSPPLRSAKLDHAPRISFLKPLKSRQARSVSVVKANFPNYCTKAALNGNLETVGVPTSVPVRVAHELLLAGHRYLDVRTPEEFNAGHAPGAINVPYMYRVGSGMTKNANFVAEVSSHFRKDDEIIVGCQLGKRSMMAATDLLVAGFSGITDIAGGFAAWTQNGLPTEQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5496g00009 180 CDD RHOD 87 171 - -
Pral5496g00009 180 Gene3D - 58 179 IPR036873 -
Pral5496g00009 180 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 24 179 - -
Pral5496g00009 180 SMART rhod_4 70 177 IPR001763 -
Pral5496g00009 180 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 66 179 IPR036873 -
Pral5496g00009 180 ProSiteProfiles Rhodanese domain profile. 80 180 IPR001763 -
Pral5496g00009 180 Pfam Rhodanese-like domain 86 173 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5496g00009 Pral-Chr5496 46832 49023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5496g00009 70 177 Sulfurtransferasese or Rhodanese AT5G66170 44.545 2.21e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5496g00009 - - aprc:113868825 241.891