Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5495g00001 ATGAGTGGCGGACTTGTTGGAAACGAGGTTTTGGAGGCTATGAGATGTGAAGTCAAGACTGAGGAGCACTCCCATGAAACACGCCATTTGCATCTTCCACATCCACTAAACTCTCAACTGGTGACCAAAAGAGATAAAGACGAGCTTCATCATCATCATCTAGTCCAAGACCTGAGAAAAAGAAAATCAAGAAACATAAATTGGTTCAGAGTGAAAGTATTCCGGATCAGGGACGAGCTTAGAAAAAGCATGAACTGTTTGACATCCACGAAGATGAAGAAATGCCATTATCAAACAACAACAAAAAGATGGGTGATTTCTCGTGAGAACAATGTGAACTCCATCAAACCCACAAGCCTGCAAGGAGGAGTGGTCGGAGAGAATAGAAGGGCACTGAGCGTCATCAATCAGAACCTGGTCGTGGAGTGTGGACACAACAAGAAGATTGCCAATCCAGTGCATCGACCAATTACCAGGAAATATGCAGCACAAATTGCTCCCACAAAGCGGCCACTCGCCGAGGAAGATAAGAAGTCGAATAATGCATCAAGTTTAAATTCAAATGGATTTGGAGAATGCATATTTTTGGATGAAGAACACAAGTCAGTGAAGGACCAGCCGGTACCCATGTCTTTAGAACAATCAGAAGAAGAAATGCAGACTGAAACAGATCAGATGAAGGAAGTTGAGATGGAGGATATAGTTGAAGATCCTATCATGGACATTGATTGCAGTGACGTGAGCAATCATCTTGCAGCTGTAGACTATGTTCAAGAACTTTATTCTTACTACAGAAAAATGGAGATTAGTAGCTGCGTCTCACCACATTATATGTCACAACAAGTTGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTCATTGAGGTGCAAGACAAGTTTGATCTTATGCGTGAGACTTTGTTTCTTACAGTGAACCTAATAGATAGGTTTTTGGAGAAGCAATCAGTGGTAAGGAAGAGGCTTCAATTGGTGGGTTTAGTGGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCGGTTCCTGTGGTGGAGGATCTGATACTTATATCAGACAAAGCATATACAAGGAAAGAAATTCTTGAAATGGAGAAGTTGATGCTTAGCACATTGCAGTTTAACATGACTGTGCCCACACCATATGTGTTTATGAGACGGTTTCTAAAGGCTGCTCAAGCAGATAAAAAAATGGAGTTGCTAGCTTTCTTCTTAATAGAGATATCTCTTGTGGAGTATGGGATGTTGAAGTTCCCACCATCTTTGCTAGCTGCAGCTGCAATTTTTACAGCTCAATGCACCATCTATGGTTTCCAGCAATGGAACAAGACATGCGAATGGCACACAAACTACTCAGAAGATCAGCTATTGGAATGCTCTAAATTGATGGTTGATTTGCACCAAAGGGCTGAAAAGGGAAAACTAACTGCTGTACATAGGAAGTATTGTACATCTAAACTCAACTATACTTCAAAATGTGAACCAGCAAGTTTTCTTGTGGCGAACCAATTATAG 1539 0.4126 MSGGLVGNEVLEAMRCEVKTEEHSHETRHLHLPHPLNSQLVTKRDKDELHHHHLVQDLRKRKSRNINWFRVKVFRIRDELRKSMNCLTSTKMKKCHYQTTTKRWVISRENNVNSIKPTSLQGGVVGENRRALSVINQNLVVECGHNKKIANPVHRPITRKYAAQIAPTKRPLAEEDKKSNNASSLNSNGFGECIFLDEEHKSVKDQPVPMSLEQSEEEMQTETDQMKEVEMEDIVEDPIMDIDCSDVSNHLAAVDYVQELYSYYRKMEISSCVSPHYMSQQVDINERMRAILIDWLIEVQDKFDLMRETLFLTVNLIDRFLEKQSVVRKRLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEILEMEKLMLSTLQFNMTVPTPYVFMRRFLKAAQADKKMELLAFFLIEISLVEYGMLKFPPSLLAAAAIFTAQCTIYGFQQWNKTCEWHTNYSEDQLLECSKLMVDLHQRAEKGKLTAVHRKYCTSKLNYTSKCEPASFLVANQL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5495g00001 512 Pfam Cyclin, C-terminal domain 387 502 IPR004367 -
Pral5495g00001 512 SUPERFAMILY Cyclin-like 248 384 IPR036915 -
Pral5495g00001 512 FunFam G2/mitotic-specific cyclin-1 364 499 - -
Pral5495g00001 512 Pfam Cyclin, N-terminal domain 260 384 IPR006671 -
Pral5495g00001 512 CDD CYCLIN_AtCycB-like_rpt2 387 503 - -
Pral5495g00001 512 SMART cyclin_7 391 473 IPR013763 -
Pral5495g00001 512 SMART cyclin_7 294 378 IPR013763 -
Pral5495g00001 512 Gene3D - 273 385 - -
Pral5495g00001 512 SMART Cyclin_C_2 387 504 IPR004367 -
Pral5495g00001 512 CDD CYCLIN_AtCycB-like_rpt1 236 382 - -
Pral5495g00001 512 Coils Coil 212 232 - -
Pral5495g00001 512 ProSitePatterns Cyclins signature. 289 320 IPR006671 -
Pral5495g00001 512 Gene3D - 260 500 - -
Pral5495g00001 512 SUPERFAMILY Cyclin-like 386 504 IPR036915 -
Pral5495g00001 512 PANTHER CYCLINS 216 483 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5495g00001 Pral-Chr5495 3264 10371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5495g00001 105 508 Core Cell Cycle Gene Families AT1G20610 54.524 1.10e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5495g00001 K21777 - gmx:100798068 579.711