Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5493g00003 ATGGGAAGACCTTCTTCTTTTGTTTTCCTCTTCTTACTCCATTCCTTCATGGCCTCCTTAGCTTGGAGTGATACAAATATCACTACCGACAAATCTGCACTTCTTGTCTTTAAATCCTTTATCACTTCAGATCCACACAATTTCTTAGCTAATTGGTCTGTCTCTTCTTCTCCATGCAGTTGGATTGGTATCACATGCAATACTCGTCACGGAAGAGTCCATTCCTTGAATCTTGGTGGCATGGATCTTAAGGGTACCATATCTCCACAACTAGGAAATCTCTCATTCCTTGTTGAACTTGACCTCAGTGACAACGATTTTCATCATCAAATACCAAACGAGCTAGTTAAATTGCGTAGATTGGAACTACTCAATTTGAGCTGCAATGACTTTCATGGGCAAGTTCCAACAGGGATAGGAGGTTTATCTTCACTTGAGAAACTAAATCTTCGAAATAATAGTCTTAATGGAATTATTCCACCATCTCTATTCAATCTGACAATGTTAGAGACATTGGATTGGAATTTTAATTACATTGAAGGGACCTTTCTGCTTGAGGTGGGAAGACTTGAGAAATTGACCATTTTACGTCTTGCGGGTAACAAGCTTTCAGGAAATATTCCCCGAACAATTTCCAACTTATCTTCACTTGAGTTATTGAGTTTGTCTTATAACAATTTGTCAGGGAGCATCCCAAGTGAGATTGGGAATCTTTCACAATTGAAGAAATTGTATCTTGGAAATAATCAACTTGTTGGTTCAATACCATCTTCATTATTCAACAATTCAATGCTGCAAGGCTTTGCGCTTGGAATAAATAACTTATCTGGCAGTCTCCCAACAAATTTGTGTGTTGGGCTTCCAAAGCTACAAATATTTTATGTGAATGGAAATGATTTGGATGGCGAAATACCCTCTGCTTGGCATCAATGCACAGAATTATTAGAATTAAAATTGGGGCATAACAAATTCAACAGAGGAAACATACCAACTGGTATTGGAAATCTGACCAAACTTCAGTTGCTATATCTTCACAGCAGCAACCTGCAAGGAATCCTTCCAAGTGAGATTGGAAATTTGACAAACCTCGAAATTCTTGTTCTTCACTTCAACAATTTGCAAGGTTTTATACCCAAAGGGATAGGCAAACTTGATAAACTTAATGTCTTAGGCTTGGACTCTAATTATTTGCAAGGACCTATTCCTTCAAATATATTCAATATTTCGACATTGAGAATCTTAAGCCTTGGCGGTAATTCCCTCTCCGGCCTTCTCCCGTCATATTTAGGAATTGACCTTCCCAACCTGGAGACCTTATCGCTGGATGCAAATGATCTAATTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTGAGTTAGATTTGTCATTGAATAAGTTTAGCGGAGCTATACCCCATCAAGTTGGAAATTTAAAAAATTTGATCAATTTAGCTTTGCATGGGAATAATTTGACTGGGTTGATTCCAAATGCAATTAGTAAATTACATAGTCTTCAACGTTTAAGTCTCAACAACAATAGATTGCAAGGGTCCATTATAAATGACTTTTGTCAACTAGAAAGGCTAAGTGAGTTGAATCTTGCAAACAATATGTTTACGGGGGCAATTCCAGAATGTTTTGGGAATACTTCTTTGCGACAGTTGAATTTTAGCTTTAACAAATTGATTTCTCATATACCATCTTCTCTTTGGAGTCTCAAAGATATTTTGGTTTTAGACATATCTTCCAATGCATTGAGTGGAATAATTTCACCAGAGATATCAAACTTGAGGGCAATTATACTATTGAATTTGTCAAGAAACCAAATTTTAGGAAGCATCCCTGCAACTATGGGTGAGTTGACAACTTTGCAAGACCTAGCTTTGGCTCACAACAAATTACAAGGGCCTATACCTAGATGGCTAAGTGGCATGATAAGTATTGAGTCAATAGATCTTTCTCATAATTACTTGTGTGGTATGATACCAAAGTCCTTAGAGTCACTACACTATCTTAAATCTATTGATCTTTCATACAATTTATTGAATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGAAAACCCCAACTACAAGTCCGACCGTGTAGGAGAGGAAAGAAGCACATATCAAATAAAGTAATGTTGGTGATAAAATGCTCAATGCCTATCCTGGTTGTCATTTTGGTTTTTATAGGTATTGTCTCTCTAAAGCATAACAGAGATGATGCTAACTATGCAACCAATAGGGATTTAACAAATTTGGATGCACCAACTAGGATATCCTATTATGACCTTCTACAAGGAACAAATGGATTTGATGAGGGTAATCTTCTTGGCTCTGGGAGTTTTGGATCAATATATAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTATTTGACATAGACATGGAAGAAGCATCGAGAAGTTTTGATATTGAATGTGCTGCTATGTGCAATTTGCGACATCACAATCTTATTAAGATTATCAGTAGTTGCTCTAATGATGATTTCAAGTCTCTAATCATGGAATTCATGTCAAATGGAAGTCTTCATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCCTGCAAAGGTTGAATATAATGGTTGATGTGGCAGCTGCATTAGAGTATCTTCATCATGGTACTTTAACTCCAATTGTTCATTGTGACATAAAACCAAGTAATATTTTGTTGGATGAAGACATGGTGGCTCATCTAAGTGATTTTGGTATAGCTAAACTATTAAGTGAAGAACAGTTGGAAATTCATACAAAAACATTGGCTACAGTTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGCATTGTTCTAATGGAGATGTTTACGAGGAAGAAGCCAACCGACGAAATGTTTGTTGAAGGCCTTGGTTTAAAAGATTGGGTTAGCAAGTCAACACGACATTCAATCATCAATATTCTAGATGTCAATTTGCTGCATCAAGGAAATCCAAATATCAGCAATATATTACCACATATATCATCAATTTTTGATTTGGCATTAAGTTGTTGCACCGAATTACCTGAGGCTCGAATTACGATGACTGATGTTGTAGTCTCATTAAAAAAGATAAGGTCATATTTACGTAAAATACTAGAGACGTGCCACTAG 3234 0.363 MGRPSSFVFLFLLHSFMASLAWSDTNITTDKSALLVFKSFITSDPHNFLANWSVSSSPCSWIGITCNTRHGRVHSLNLGGMDLKGTISPQLGNLSFLVELDLSDNDFHHQIPNELVKLRRLELLNLSCNDFHGQVPTGIGGLSSLEKLNLRNNSLNGIIPPSLFNLTMLETLDWNFNYIEGTFLLEVGRLEKLTILRLAGNKLSGNIPRTISNLSSLELLSLSYNNLSGSIPSEIGNLSQLKKLYLGNNQLVGSIPSSLFNNSMLQGFALGINNLSGSLPTNLCVGLPKLQIFYVNGNDLDGEIPSAWHQCTELLELKLGHNKFNRGNIPTGIGNLTKLQLLYLHSSNLQGILPSEIGNLTNLEILVLHFNNLQGFIPKGIGKLDKLNVLGLDSNYLQGPIPSNIFNISTLRILSLGGNSLSGLLPSYLGIDLPNLETLSLDANDLIGQIPNSISNASKLIELDLSLNKFSGAIPHQVGNLKNLINLALHGNNLTGLIPNAISKLHSLQRLSLNNNRLQGSIINDFCQLERLSELNLANNMFTGAIPECFGNTSLRQLNFSFNKLISHIPSSLWSLKDILVLDISSNALSGIISPEISNLRAIILLNLSRNQILGSIPATMGELTTLQDLALAHNKLQGPIPRWLSGMISIESIDLSHNYLCGMIPKSLESLHYLKSIDLSYNLLNGEIPNGGPFQNFTAQSFMMNKDLCGKPQLQVRPCRRGKKHISNKVMLVIKCSMPILVVILVFIGIVSLKHNRDDANYATNRDLTNLDAPTRISYYDLLQGTNGFDEGNLLGSGSFGSIYKAILPNEKIVAVKVFDIDMEEASRSFDIECAAMCNLRHHNLIKIISSCSNDDFKSLIMEFMSNGSLHRWLYSHNYCLDILQRLNIMVDVAAALEYLHHGTLTPIVHCDIKPSNILLDEDMVAHLSDFGIAKLLSEEQLEIHTKTLATVGYMAPEYGSKGVVSFKGDVYSYGIVLMEMFTRKKPTDEMFVEGLGLKDWVSKSTRHSIINILDVNLLHQGNPNISNILPHISSIFDLALSCCTELPEARITMTDVVVSLKKIRSYLRKILETCH 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5493g00003 1077 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 866 1075 - -
Pral5493g00003 1077 Pfam Protein kinase domain 792 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5493g00003 1077 FunFam Leucine-rich repeat receptor-like protein kinase TDR 492 722 - -
Pral5493g00003 1077 SUPERFAMILY L domain-like 430 714 - -
Pral5493g00003 1077 Gene3D Ribonuclease Inhibitor 182 286 IPR032675 -
Pral5493g00003 1077 Gene3D Ribonuclease Inhibitor 287 430 IPR032675 -
Pral5493g00003 1077 SUPERFAMILY L domain-like 287 427 - -
Pral5493g00003 1077 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 277 476 - -
Pral5493g00003 1077 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Pral5493g00003 1077 SUPERFAMILY L domain-like 28 325 - -
Pral5493g00003 1077 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 276 - -
Pral5493g00003 1077 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pral5493g00003 1077 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 27 182 - -
Pral5493g00003 1077 SMART serkin_6 790 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5493g00003 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 909 921 IPR008271 GO:0004672|GO:0006468
Pral5493g00003 1077 ProSitePatterns Protein kinases ATP-binding region signature. 796 818 IPR017441 GO:0005524
Pral5493g00003 1077 Gene3D Transferase(Phosphotransferase) domain 1 866 1074 - -
Pral5493g00003 1077 ProSiteProfiles Protein kinase domain profile. 790 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5493g00003 1077 SUPERFAMILY Protein kinase-like (PK-like) 771 1069 IPR011009 -
Pral5493g00003 1077 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Pral5493g00003 1077 Gene3D Ribonuclease Inhibitor 431 728 IPR032675 -
Pral5493g00003 1077 Gene3D Phosphorylase Kinase; domain 1 752 865 - -
Pral5493g00003 1077 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 331 1064 - -
Pral5493g00003 1077 SMART LRR_typ_2 238 262 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 600 624 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 433 457 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 529 552 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 553 576 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 505 528 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 336 359 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 94 118 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 481 504 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 190 213 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 142 166 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 287 311 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 360 384 IPR003591 -
Pral5493g00003 1077 SMART LRR_typ_2 214 237 IPR003591 -
Pral5493g00003 1077 Pfam Leucine rich repeat 626 685 IPR001611 GO:0005515
Pral5493g00003 1077 Pfam Leucine rich repeat 459 518 IPR001611 GO:0005515
Pral5493g00003 1077 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5493g00003 Pral-Chr5493 44509 59662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5493g00003 6 1066 Receptor kinase-like Gene Family AT5G46330 34.138 3.32e-178 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5493g00003 Pkinase 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5493g00003 - K13420 pcin:129285519 1049.65