Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5489g00003 ATGAAGCGCCTGGTGCAAAAGCTTGCTCAAGACTCAAGTGACGAGTTTGTGAAAATGGAAATGAAGCCAAGGTTTTCAGAGATGACGTTCAACACTATGATGAGAATGATTTCAGGTAAGAGGTACTGGGGAGATGACCATGAAGTTGGGGACGTGGAAGAGGCAAGAAAGTTCAGAGAGATGATAAAGGAGTTGGTGACATTTGGAGGGGCAAATAACCCCGCAGACTTCTTGCCCATATTGAGGTGGTTTGATTATGATCACTTGGAGAGCAGGCTCAAGGGTTTCGCCAAGAGAAGTGATGGATTCTTGCAAGGACTCATTGACGAGCATCGAAATGCAAAGGAGAAAGCAAATACTATGATAGATCATCTTTTGAGTCTCCAAGAATCGCAGCCTGAGTACTACACGGATCAAATTATCAAGGGCCTCGCTTTGGTTATGCTTCTTGCTGGAACGGATACATCAGCTACGACGTTAGAATGGGCAATGACTTGTTTACTAAACAATCCTCATGTGTTGGAAAAGGCAAAGAAAGAAATAGACACCCAAATTGGGAATGAACGATTAATAGATGAGCCAGACATGTCAAAACTACCATACCTGCAAAACATTATCTCTGAAACACTTCGATTGCATCCTGCTGCACCATTGTTGGTTCCACATGAGGCTTCAAATGACTGCACAATCGCAGGATACAATGTTCCACGAGGCACTATGGTATTAATCAATGCTTGGGCAATCCATAGAGATCCCCAGCTGTGGAGCGATCCTACAGGTTTTATGCCGGAGAGGTTTGAGAAAGAAGGAGAAGCAAACAAGTTAATTCCATTTGGGTTGGGAAGACGAGCATGTCCTGGATCAGGTTTAGCTCAACGAACTGTGGGACTGACTTTGGGATTATTGATTCAATGCTTTGAATGGAAACGAGTAAGTGAGGAAGAAATTGATGAGACAGAAGGAGCAGGGGTCACCATGCCAAAAGTTATTCCTTTGGAGGCCATGTGTAAAGCACGCCATCCAATCATCAACAAGCTTTCTGCTTAA 1047 0.4384 MKRLVQKLAQDSSDEFVKMEMKPRFSEMTFNTMMRMISGKRYWGDDHEVGDVEEARKFREMIKELVTFGGANNPADFLPILRWFDYDHLESRLKGFAKRSDGFLQGLIDEHRNAKEKANTMIDHLLSLQESQPEYYTDQIIKGLALVMLLAGTDTSATTLEWAMTCLLNNPHVLEKAKKEIDTQIGNERLIDEPDMSKLPYLQNIISETLRLHPAAPLLVPHEASNDCTIAGYNVPRGTMVLINAWAIHRDPQLWSDPTGFMPERFEKEGEANKLIPFGLGRRACPGSGLAQRTVGLTLGLLIQCFEWKRVSEEEIDETEGAGVTMPKVIPLEAMCKARHPIINKLSA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5489g00003 348 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 278 287 IPR017972 GO:0005506|GO:0016705
Pral5489g00003 348 PANTHER CYTOCHROME P450 82C3-RELATED 2 341 - -
Pral5489g00003 348 PRINTS E-class P450 group I signature 285 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS E-class P450 group I signature 160 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS E-class P450 group I signature 140 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS E-class P450 group I signature 275 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS E-class P450 group I signature 244 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS E-class P450 group I signature 28 46 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 SUPERFAMILY Cytochrome P450 3 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 CDD CYP81 2 332 - -
Pral5489g00003 348 PRINTS P450 superfamily signature 151 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS P450 superfamily signature 204 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 PRINTS P450 superfamily signature 276 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 FunFam Cytochrome P450 81D1 121 342 - -
Pral5489g00003 348 Pfam Cytochrome P450 2 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5489g00003 348 Gene3D Cytochrome P450 1 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5489g00003 Pral-Chr5489 25859 46673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5489g00003 1 343 Cytochrome P450 AT4G37370 62.209 8.24e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5489g00003 K13260 - gmx:100811727 520.776