Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5488g00002 ATGAGCTCCTTCTTATTCCATTATTTCCTTCTTTCTCTTGCTTTCTTCTTCACTCCCAAGCTCTTCCTTCAAAATAAGAAGCTCAAAAACATCCCACCTGGTCCACCTTCTGTTCCCTTTATCGCCAACCTCCACCAACTGAAAAAGCCACTTCATCGTGCCCCTCACCGGATTTCTCAACGTTATGGCCAAATCATTTCTCTTTGGTTTGGCTCTCGTCTTTTCGTCGTTGTCTCGTCGCCGTCCGCAGTCCAAGAATGCTTCAACAAAAACGACATCGTCCTGGCAAATCGGCCCCGCTTTCTTACCGGACAGTATGTTTCTTACAACTGCACCATCATAGACTTCGCTCCATATGGCGACCACTGGCGCAACCTCCGTCGCATTACGGTAGTCGAGATGCTCTCGAGCCACCGTCTAAACGCATTCTTGGAAATGCGAAGAGACGAGGTGAAGCGCCTGGTGCAAAAGCTTGCTCGAGACTCACATAAAGAGTTCACCAAAGTGGAGATGAAATCAAGATTCTCCGAGATAAGCTTCAACGCTCTCATGAAAATGATTTTGGGGAAAAGGTATTGGACAGACGACAATGAGGCTGGGGATGTGGAAGAGGGAAGAAAATTTCGAGGGATTATGCATGAGTTTGTGCCAATAGCAGGGGCAAATAACGCTGCAGACTACTTGCCCATATTGAGGTGGTTTGATTATGATCACTTGGAAAGCAGGCTCAAGAGTATGGCCAAGGGAATAGACGGGTCCCTGCAAGGGCTCATTGATGAGCATCGAAATCAAAGCACAAAGCAAACTCTATGA 813 0.4711 MSSFLFHYFLLSLAFFFTPKLFLQNKKLKNIPPGPPSVPFIANLHQLKKPLHRAPHRISQRYGQIISLWFGSRLFVVVSSPSAVQECFNKNDIVLANRPRFLTGQYVSYNCTIIDFAPYGDHWRNLRRITVVEMLSSHRLNAFLEMRRDEVKRLVQKLARDSHKEFTKVEMKSRFSEISFNALMKMILGKRYWTDDNEAGDVEEGRKFRGIMHEFVPIAGANNAADYLPILRWFDYDHLESRLKSMAKGIDGSLQGLIDEHRNQSTKQTL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5488g00002 270 Gene3D Cytochrome P450 24 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00002 270 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00002 270 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00002 270 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00002 270 PANTHER CYTOCHROME P450 82C3-RELATED 18 266 - -
Pral5488g00002 270 Coils Coil 141 161 - -
Pral5488g00002 270 Pfam Cytochrome P450 32 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00002 270 SUPERFAMILY Cytochrome P450 32 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5488g00002 Pral-Chr5488 24306 25118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5488g00002 5 270 Cytochrome P450 AT4G37430 43.956 5.93e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5488g00002 K13260 - gmx:100811727 337.421