Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5488g00001 ATGATCACCTTCTTGTTCTATTATTCCCTTCTTTCTCTTGCTTTCTTCTTTGCTCTCAAGCTCCTTCTTCAAAATAAGAAGTTCACAAACATCCCACCTGGCCCACCTTCTCTTCCCATACTCGGCAATCTTCACCAACTAGGAAAGCCACTTCATCAAGCCTTACACAGGATTTCTCAAAGTTATGGTGAAGTCTTTTCTCTTTGGTTTGGCTCTCGCCTCTTTGTCATTGTCTCATCGCAGTCCGCAGTCCAAGAATGCTTCACCAAAAACGACATCGTCCTGGCAAATCGCCCCCGGTTTCTCATCGGAGAGTATGTTGCCTACAACTGCACCACCTTAACGTTGGCTCCCTATGGCGACCATTGGCGCAACCTCCGCCGCATCACAGCGCTTGAGGTGCTCTCGAACTACCGCCTCAACAAATTCTTGGAAATGCGAAGAGAGGAGGTGAAGCGGCTGGTTCAAAAGCTTGCTCAAGAATCAGTACACAAGGATCAGTTCCTCAAAGTGGAGATGAAATCAAGATTTTCAGAGTTGACTTTCAACATTATAATGAGAATGATTTCCGGCAAAAGGTATTGGGGAGACGACAACGAGGTTGGGGATGTGGAAGAGGCCAGAAAGATTCGAGAGATTATAAAGGAATTGGTGTCGCTAGGAGGGGCAAATAACAGCGCAGATTTCTTGCCCATACTTTGGTGGTTTGATTTTGGTCACTTGGAGAAGAAGCTCAAGGGTTTGGCCAAGAGAGCCGATGGGTTCTCTCAAGGACTCATTGATGAGCATCGACGCGCAAAGCAGAGAGCAAATACTATGATCGATCATCTCTTGAGTCTCCAAGAATCACAGCCTGAGTACTATACGGATCAGATTATTAAAGGCCTCATATTGGTCATGGTTTTTGCTGGAACGGATACTTCATCTGTGACTTTAGAATGGGCAATGTCAAGTTTATTAAACAATCCTCATGTGTTGGAAAAAGCAAAGAAAGAAATAGACACACATATAGGGCAAGAACGATTAATAGATGAGCCAGAAATCTCAAAACTGCCATACTTGCAAAACATTGTCTCTGAAACACTTCGATTGCATCCTGCCCTACCATTGTTGCTTGCACATGAGGCTTCGAATGATTGTACCATTTCAGGATATAATGTTCCTCGCGGAACTATTGTGTTAATCAATGCTTGGGCTAACCATAGAGATCCCCAGTTATGGAGTGATCCAACGAGTTTTAAGCCAGAGAGGTTTGAGAAAGAAGGAGAAGCAAACAAGCTAATTACATTTGGGTTGGGAAGACGAGCTTGTCCTGGAGAAAGTTTAGCCCAACGAACAGTGGGCTTGACTTTGGGATTGTTGATTCAATGCTTTGAATGGAAACGGGTAAGTGAGGAAGAAATTGACATGACAGAAGGAGCAGGAGCCACCATGCCGAAAGTTATTCCTTTAGAGGCCATGTGTAGAGCACGCCATCCAATCATTAACATGCTTCTTTCTTAA 1503 0.4424 MITFLFYYSLLSLAFFFALKLLLQNKKFTNIPPGPPSLPILGNLHQLGKPLHQALHRISQSYGEVFSLWFGSRLFVIVSSQSAVQECFTKNDIVLANRPRFLIGEYVAYNCTTLTLAPYGDHWRNLRRITALEVLSNYRLNKFLEMRREEVKRLVQKLAQESVHKDQFLKVEMKSRFSELTFNIIMRMISGKRYWGDDNEVGDVEEARKIREIIKELVSLGGANNSADFLPILWWFDFGHLEKKLKGLAKRADGFSQGLIDEHRRAKQRANTMIDHLLSLQESQPEYYTDQIIKGLILVMVFAGTDTSSVTLEWAMSSLLNNPHVLEKAKKEIDTHIGQERLIDEPEISKLPYLQNIVSETLRLHPALPLLLAHEASNDCTISGYNVPRGTIVLINAWANHRDPQLWSDPTSFKPERFEKEGEANKLITFGLGRRACPGESLAQRTVGLTLGLLIQCFEWKRVSEEEIDMTEGAGATMPKVIPLEAMCRARHPIINMLLS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5488g00001 500 Coils Coil 141 161 - -
Pral5488g00001 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Pral5488g00001 500 FunFam Cytochrome P450 family protein 22 494 - -
Pral5488g00001 500 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 CDD CYP81 63 484 - -
Pral5488g00001 500 Pfam Cytochrome P450 32 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 Gene3D Cytochrome P450 20 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PANTHER CYTOCHROME P450 82C3-RELATED 15 493 - -
Pral5488g00001 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5488g00001 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5488g00001 Pral-Chr5488 18884 21594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5488g00001 2 498 Cytochrome P450 AT4G37370 55.800 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5488g00001 K13260 - gmx:100811727 670.618