Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5486g00001 ATGGCCTCCTGCGACGACGACCTTCTCCTCCTCAGTGACGATCATCACCAATCAAGCGCTGGCCCCCACCACCACCTTCACCAAACCTACGCACCGCATTCCTTCTCATCCGCCGTCACGCCTGTGCCGTCGGAACCGGTAGGTGACACCAGCGAAGTCTATGGATTTGATAACGAGGCCGACGACAACGACAAGCGAACTGATCGGGAGGAGGCCGGCGACGGTACGACGTCGTACGGATACAAAAGGCCCAAGCTTTCGAACGGCGGGGAGTATAGGAAGGATAGGGAGGAGTGGAGCGACGCCGCGATTGTTTGCCTGCTTGAGGCTTATACAGAGAAGTTCACTCAGCTGAATCGCGGGAACCTTAGAGGGAGGGATTGGGAGGAAGTGGCGTCAATAGTTAGTGAGCGGTGCGAAAATCAAACCAAGAGTGTGGAGCAATGCAAGAATAAAGTCGATAATTTGAAGAAGAGGTATAAGTTGGAAAGGCATAGGATGAGCAATGGCTGCATTTCAGCCAGTCATTGGCCTTGGTTCAAGCAGATGGAACAGATCGTTGGCAATTCGCTATCTACAAAGTATGTGCAGGATGAAGACAAGGGGATCGGTTCTGGGGATTCGCCGAGACAACCGAAGAGATATGGAGTCGCAATGTCCAGCAGTGGAGGTCAGCTGAATAGCTTGAAGTCAAAACCAATGTCAAATGTTAGATGGCGTAGGGTAGTCTTCAAAATTAGCGGAGCAGCTCTTACTGGATCTGCTACCTGCAATATTGACCCAAAGGTGGCCACGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAACGGTGTGGAGGTGGCCATTGTTGTTGGAGGTCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCCACTGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCTACTGTGATGAATTCTATATTACTCCAATCAACTCTAGAGAAGATGGGCGTTCAAACTCGTGTACAAACTACCATTGCCATGCATGAATTTGCTGAACCATACAATAGGCAGCGGGCCATTAGACATCTTGAGAAAGGCAGAGTTGTTATATTTGGCGGCATTGGTTTTGGCACTGGAAATTCACTCTTTTCAACTGATATAGCTGCAGCTCTTCGAGCTTCTGAGATTAATGCGGAGGCTGTTCTCAAGGGTACTAATGTAGACGGTGTGTATGACTGCAACTCCCGGGATGGCAATTTCACCTTTGAGCACATTTCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCTATGGATATGACGGCACTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCCTTGTGCGGAGAACAAGTCGGTACACTAATTGACCAAACCGGATCCATGAGCTGA 1437 0.4892 MASCDDDLLLLSDDHHQSSAGPHHHLHQTYAPHSFSSAVTPVPSEPVGDTSEVYGFDNEADDNDKRTDREEAGDGTTSYGYKRPKLSNGGEYRKDREEWSDAAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMSNGCISASHWPWFKQMEQIVGNSLSTKYVQDEDKGIGSGGXSPRQPKRYGVAMSSSGGQLNSLKSKPMSNVRWRRVVFKISGAALTGSATCNIDPKVATLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTTIAMHEFAEPYNRQRAIRHLEKGRVVIFGGIGFGTGNSLFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDGNFTFEHISFRELVSRGATSMDMTALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGSMS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5486g00001 479 CDD AAK_UMPK-PyrH-Ec 241 473 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pral5486g00001 479 MobiDBLite consensus disorder prediction 13 91 - -
Pral5486g00001 479 Gene3D - 99 162 - -
Pral5486g00001 479 Hamap Uridylate kinase [pyrH]. 238 473 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pral5486g00001 479 Pfam Myb/SANT-like DNA-binding domain 96 186 IPR044822 -
Pral5486g00001 479 Gene3D - 235 473 IPR036393 -
Pral5486g00001 479 MobiDBLite consensus disorder prediction 30 44 - -
Pral5486g00001 479 Coils Coil 139 166 - -
Pral5486g00001 479 PANTHER URIDYLATE KINASE 92 477 - -
Pral5486g00001 479 FunFam Aspartate/glutamate/uridylate kinase family protein 99 162 - -
Pral5486g00001 479 MobiDBLite consensus disorder prediction 198 218 - -
Pral5486g00001 479 MobiDBLite consensus disorder prediction 58 76 - -
Pral5486g00001 479 Pfam Amino acid kinase family 242 452 IPR001048 -
Pral5486g00001 479 FunFam Uridylate kinase isoform A 232 478 - -
Pral5486g00001 479 SUPERFAMILY Carbamate kinase-like 239 472 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5486g00001 Pral-Chr5486 12592 16940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5486g00001 70 190 Trihelix Transcription Factor Family AT3G14180 39.024 5.71e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5486g00001 AA_kinase 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5486g00001 - - gmx:100805176 728.013