Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5485g00036 ATGGCAGCAAAAGAGGCATTGGAGTCCCGGAACCAAGCGCGACTGGCAATTCTGGAACTGGCCAACATGATCAGTGTGCCCATGTCCCTCAATGCCATCGTCCGACTCAACGTTCCCGACGCTATCTGGCAGTCCGGCTCCAACACTCCCCTCTCCGCCTCTGAGATCCTTTCGCGCGTCCTTCCCACCGGCGGCGATGCCGAAAATCTCCAACGAATCCTTCGTATGCTCACCAGTTATGGCGTCTTCGCCGAGCACATCGGCTCTGGCGGCGAGAGAAAATACTCCCTAACCGACGTCGGCAAAACCCTCGCCACCGATGACGAAGGCCTATCCTACGCGGCCTACGTACTCCAGCACCACCAGGACGCGTTGATTCGAGCGTGGCCCTTGGTGCACGAGGCAGTGAAGGACTCAACGGAGGAGCCGTTCGTGAAGGCGAACGGAGAGGCGGCGTACGATTACTATGTGAAAGATCCGGAGATGAACGAATTGATGGTGAAGGCGATGTCGGGGGTATCGGTACCGTTCGTGAAGGCGGTGCTGGAGGGTTACGATGGTTTCGAAGGGGTGGAGAGATTGGTAGACGTGGGTGGGAGTGGAGGGGATTGTCTGAGGATGATCTTACAGAAACATCCGAGCGTGAGGGAAGGGATTAACTTCGATCTGCCTGAAGTGGTGGCGAAAGCACCGGCAATTTCTGGTAAGCCGGTCACTCACGTGGGAGGTGACATGTTCAAGTCTATTCCTCAAGGGGATGCCGTCTTCATGAAGTGGGTACTGACAACGTGGACGGACGAGGAGTGCAAGAGGATACTGGAGAACTGTTACAAGGCTCTGCCGGAGGGAGGAAAAGTGATAGCTTGTGAGCCAGTGCTGCCCGAGGAATCAGATGACAGCCACAGAACTCGAGCATTGCTGGAGGGTGACATTTTTGTGATGACAATCTACAGAGCCAAAGGTAAGCATCGCACCCAGGATCAGTTCAGGCACCTCGGCCTCTCTGCTGGTTTCTCTCGTTTCCGTGTCCTCCATTTTGACTACTTCTATGCCCTCCTTGAATTCCAAAAGTGA 1074 0.5521 MAAKEALESRNQARLAILELANMISVPMSLNAIVRLNVPDAIWQSGSNTPLSASEILSRVLPTGGDAENLQRILRMLTSYGVFAEHIGSGGERKYSLTDVGKTLATDDEGLSYAAYVLQHHQDALIRAWPLVHEAVKDSTEEPFVKANGEAAYDYYVKDPEMNELMVKAMSGVSVPFVKAVLEGYDGFEGVERLVDVGGSGGDCLRMILQKHPSVREGINFDLPEVVAKAPAISGKPVTHVGGDMFKSIPQGDAVFMKWVLTTWTDEECKRILENCYKALPEGGKVIACEPVLPEESDDSHRTRALLEGDIFVMTIYRAKGKHRTQDQFRHLGLSAGFSRFRVLHFDYFYALLEFQK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5485g00036 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Pral5485g00036 357 FunFam Caffeic acid 3-O-methyltransferase 110 357 - -
Pral5485g00036 357 Gene3D Vaccinia Virus protein VP39 110 357 IPR029063 -
Pral5485g00036 357 PANTHER O-METHYLTRANSFERASE 20 347 IPR016461 GO:0008168
Pral5485g00036 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 355 IPR029063 -
Pral5485g00036 357 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Pral5485g00036 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 357 IPR016461 GO:0008168
Pral5485g00036 357 Gene3D - 2 109 IPR036388 -
Pral5485g00036 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 107 IPR036390 -
Pral5485g00036 357 Pfam O-methyltransferase domain 132 339 IPR001077 GO:0008171
Pral5485g00036 357 CDD AdoMet_MTases 193 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5485g00036 Pral-Chr5485 210140 212971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5485g00036 4 357 Monolignol Biosynthesis Gene Families AT3G53140 74.652 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5485g00036 - - csav:115722698 582.793