Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5484g00046 ATGGGGACAGAAGAATCCAACAAAAGTACTAAACCCAGCAAAACTATGGTGGTTCAGGATGAAACTGAAAACAAACCTTTGCAGCCGCTTTGGTATACTTCTATACAGGGATATCATTATCCTATGCCTGCACCAACACCTATTATAAATTCACATGCAGCTGCAGCCGGTTCTTACTATTATCCCCACATTTGGCCAAACCAGACTTTCTGCAGTCCCCTTAAATATGACCCTCTGCATGATCCCAGCGGGCTCAAGGATCATCCAATTGTTTCCGGGGGCTCTGCTTCAACATTTTCAGATAAAGTACAAAGGACTTTCAGTGGAGAGAACGTGGATTTGACAAAAGCATGTGAAGGGAACTTACAACCTAGAAGTTCTGTCCTTAAGGAATTAAGAGAAAATGGAAATGAATCATCAATTTCCAAAAATGAGCAAGATAGAGGGACATGGAGTGCTACAAATGGAAGCATGGGATCGTCAGATGAAGGTCATGACACTGACAATGGTTTCCCTTCAAGTAGAGAGCAGCAATGTAACATGATGCTTGCAAATAGGGACCTTACACAGAATGGGGCTAGAATAGAAAATGGTAATGCAATTCACGTGAACAAAGAATCTGCGTCACAGCAATTTGCGGTGAATTCAAGTGAACCAAATCTGAATTCAGAAACTAACCTCAATACATCTGGGCCAATTCATGGACTTGCAAAACTGGAAGAAGATGAAATAAGAAAAGAAAGAAAAAGGCAATTAAATAGGGAATCAGCCAGGAGATCAAGGATGCGTAGGCAGCAAGAATGTGATGAGCTACGTAAAATCATGGATGATCTTGTGAAGAAGAATTCCTTGCTGAAGGACAAGCTTGTGAGCCTTTCTGAAGACTGTCTAGAGCTCAATAATGAAAACGACTACATAGAGGAAGAGATCACCAAGATGTATGGGACAGAATCAATTGCCGATCTTATAGCCATGAGGCCTGGCGGAGTAACTCGTTGA 999 0.4174 MGTEESNKSTKPSKTMVVQDETENKPLQPLWYTSIQGYHYPMPAPTPIINSHAAAAGSYYYPHIWPNQTFCSPLKYDPLHDPSGLKDHPIVSGGSASTFSDKVQRTFSGENVDLTKACEGNLQPRSSVLKELRENGNESSISKNEQDRGTWSATNGSMGSSDEGHDTDNGFPSSREQQCNMMLANRDLTQNGARIENGNAIHVNKESASQQFAVNSSEPNLNSETNLNTSGPIHGLAKLEEDEIRKERKRQLNRESARRSRMRRQQECDELRKIMDDLVKKNSLLKDKLVSLSEDCLELNNENDYIEEEITKMYGTESIADLIAMRPGGVTR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5484g00046 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 306 IPR004827 GO:0003700|GO:0006355
Pral5484g00046 332 Pfam bZIP transcription factor 241 303 IPR004827 GO:0003700|GO:0006355
Pral5484g00046 332 SMART brlzneu 241 305 IPR004827 GO:0003700|GO:0006355
Pral5484g00046 332 PANTHER G-BOX-BINDING FACTOR 3-RELATED 2 316 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral5484g00046 332 MobiDBLite consensus disorder prediction 1 22 - -
Pral5484g00046 332 SUPERFAMILY Leucine zipper domain 244 299 IPR046347 GO:0003700|GO:0006355
Pral5484g00046 332 Coils Coil 268 309 - -
Pral5484g00046 332 MobiDBLite consensus disorder prediction 132 175 - -
Pral5484g00046 332 Gene3D - 236 303 - -
Pral5484g00046 332 CDD bZIP_plant_GBF1 246 296 IPR045314 GO:0003700|GO:0006355
Pral5484g00046 332 MobiDBLite consensus disorder prediction 142 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5484g00046 Pral-Chr5484 343767 348094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5484g00046 1 322 bZIP Transcription Factor Family AT4G36730 25.982 6.15e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5484g00046 bZIP_1 3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5484g00046 K09060 - gmx:102665715 242.662