Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5484g00025 ATGGCTTCTTCTGATAATAACTCTAACAGACTCGTCTCGTCCGACCTCAGTCTCTTCTTCGTCTTGTTTTGTGTTTGCCTGTGTCCCCTTAGGGTTCATATGTTTCCTAATGGTTATTATAATTATCCTCCTCAACCATATGGACCTGGAAGAACCCTAGACTACAGCTTCTACGACATAACATGCCCTAACTTGCTTACGATTGTTCATTCTGCTGTCTGGTCTGCCATCAACAAGGACCCCAGAATGGCTGCCTCCCTCCTTCGTCTTCACTTCCATGATTGTATTGTCGACGGATGCGATGCATCAGTACTGCTGGATGACACACAGGAAATGCAAGGAGAAAAGAAGGCCGGCCCCAATCTCAATTCCCTTCGCGGCTTCCAAGTCATCGACGCCATTAAAGCCGACCTCGAAACCTCCTGTCCCTCCACCGTCTCCTGCGCCGACATCCTCGCCCTCGCCGCCCGAGAAGCCGTCCTCCAGGCTGGTGGCCCCTCTTGGCCTGTGGGATTGGGACGAAGAGATTCTGTAAGTGCCAGTATGGTCGCGGCCAACCAACAGATCCCCACACCTTTCGAGTCCCTTCAAAACATCACCGCCAAGTTCACTTCCAAGGGTCTTGACTTGAAGGACGTCGTCGTCCTCTCGGGAGGCCACACCATTGGATTTGCTCAGTGTTTTACGTTTAAAAACAGGCTCTTCAACTTCAAAGAGTCGGGCAAACCCGATCCTGATATGGATTCGGTGCTCCTCTCGGGTTTGCAGAGAAGGTGTCCCAACAAGGATTCTTCCAACAGAAACCTGGCCCCTCTGGATTCTGCTTCTTTTTACAGTTTCGACAACGCTTATTACAGCAACCTGGTTAAGAACTCGGGGCTCCTCCAATCTGATCAGGTTCTAAATGCTGATCCCATCACTGTTAATTGGGTGAATTACTATAGCCTCAACCAGTTCGCCTTCTTCAATGACTTCGCTGCCTCCATGGTTAAGCTCAGCAGTGTTGGGGTTCTCACAGGCCAGAATGGCCAAGTTAGGCTCAAGTGTGGCTCTGTTAATCGAGGTTAA 1068 0.5019 MASSDNNSNRLVSSDLSLFFVLFCVCLCPLRVHMFPNGYYNYPPQPYGPGRTLDYSFYDITCPNLLTIVHSAVWSAINKDPRMAASLLRLHFHDCIVDGCDASVLLDDTQEMQGEKKAGPNLNSLRGFQVIDAIKADLETSCPSTVSCADILALAAREAVLQAGGPSWPVGLGRRDSVSASMVAANQQIPTPFESLQNITAKFTSKGLDLKDVVVLSGGHTIGFAQCFTFKNRLFNFKESGKPDPDMDSVLLSGLQRRCPNKDSSNRNLAPLDSASFYSFDNAYYSNLVKNSGLLQSDQVLNADPITVNWVNYYSLNQFAFFNDFAASMVKLSSVGVLTGQNGQVRLKCGSVNRG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5484g00025 355 FunFam Peroxidase 56 202 - -
Pral5484g00025 355 CDD secretory_peroxidase 53 352 IPR033905 GO:0004601|GO:0042744
Pral5484g00025 355 ProSiteProfiles Plant heme peroxidase family profile. 52 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PANTHER PEROXIDASE 72-RELATED 52 351 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 FunFam Peroxidase 190 332 - -
Pral5484g00025 355 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 327 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Pral5484g00025 355 SUPERFAMILY Heme-dependent peroxidases 53 353 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5484g00025 355 ProSitePatterns Peroxidases active site signature. 84 95 IPR019794 GO:0004601
Pral5484g00025 355 Gene3D - 56 353 - -
Pral5484g00025 355 Gene3D Peroxidase, domain 2 190 332 - -
Pral5484g00025 355 Pfam Peroxidase 70 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5484g00025 Pral-Chr5484 178683 182852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5484g00025 32 350 Peroxidase AT1G49570 61.300 4.66e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5484g00025 K00430 - qsa:O6P43_011686 437.958