Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5484g00022 ATGGATCGTTCGGCCATCACAGTGGGCCAGATGGATATGCCGATCATGCATGATAGCGATCGATATGAACTCGTGCGCGATATTGGGTCTGGCAATTTCGGGGTCGCCAGGCTTATGAGGGACAAGCAGACAGAGGAGCTTGTCGCTGTGAAGTATATTGAGAGAGGTGATAAGATAGATGAGAATGTGCAAAGGGAAATTATAAATCACAGGTCACTGAGGCATCCTAACATTGTCAGGTTTAAGGAGGTCATATTGACCCCAACACATTTAGCTATTGTGATGGAATATGCTTCTGGAGGGGAGCTATTTGAACGAATCTGCAATGCAGGGAGGTTCAACGAGGATGAGGCACGGTTCTTCTTCCAGCAGCTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGATTTGAAGTTAGAGAACACACTGTTAGATGGAAGTCCAGCTCCTCGCTTGAAGATTTGTGATTTTGGGTACTCGAAGTCCTCGGTGCTTCATTCGCAACCGAAGTCTACAGTTGGCACTCCTGCGTACATTGCTCCTGAAGTGTTGCTGAAGAAGGAATATGATGGCAAGATTGCAGACGTGTGGTCTTGTGGGGTAACCTTATATGTGATGTTGGTTGGTGCATATCCTTTTGAGGACCCTGATGAACCTAAAAACTTCCGCAAGACAATCCATAGGATATTGAATGTCCAGTACTCAATTCCTGACTATGTTCAAATATCTCCTGAGTGCTGTCATCTGATATCAAGGATCTTCGTTGGTGAACCTTCACAGAGGATAACCATGCCTGAGATTAGAAACCATGAATGGTTTCTAAAGAATCTTCCGGCTGATCTCATGGAGGATGGTACGATGAACAACCAGTTTGAAGAGCCTGATCAACCAATGCAGAGCATCGAAGAAATCATGCAGATAATTGCTGAGGCGACAATTCCTGCGGCTGGTACTCAGTCACTCAACCAATATCTTACAGGTAGCTTGGATCTTGAGGATGACATGGATGAGGACCTAGAGACAGATCCCGACCTTGATATTGATAGCAGCGGAGAAATAATCTATGCAATGTAG 1089 0.4509 MDRSAITVGQMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKQTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFNEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIHRILNVQYSIPDYVQISPECCHLISRIFVGEPSQRITMPEIRNHEWFLKNLPADLMEDGTMNNQFEEPDQPMQSIEEIMQIIAEATIPAAGTQSLNQYLTGSLDLEDDMDEDLETDPDLDIDSSGEIIYAM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5484g00022 362 CDD STKc_SnRK2-3 21 277 - -
Pral5484g00022 362 FunFam Serine/threonine-protein kinase SRK2E 13 97 - -
Pral5484g00022 362 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Pral5484g00022 362 Gene3D Transferase(Phosphotransferase) domain 1 98 286 - -
Pral5484g00022 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pral5484g00022 362 SUPERFAMILY Protein kinase-like (PK-like) 14 295 IPR011009 -
Pral5484g00022 362 Pfam Protein kinase domain 22 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5484g00022 362 ProSiteProfiles Protein kinase domain profile. 22 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5484g00022 362 SMART serkin_6 22 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5484g00022 362 FunFam Serine/threonine-protein kinase SRK2E 98 286 - -
Pral5484g00022 362 PANTHER SERINE/THREONINE KINASE 21 304 - -
Pral5484g00022 362 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5484g00022 Pral-Chr5484 145254 149940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5484g00022 15 301 CBL-interacting serine-threonine protein kinases AT4G24400 41.528 5.47e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral5484g00022 Pkinase 4.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5484g00022 K14498 - qsu:112032862 668.307